RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SLC41A2Q96JW4 573 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 C1orf74Q96LT6 269 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 CMTM3Q96MX0 182 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 FAM110AQ9BQ89 295 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 C1QTNF5Q9BXJ0 243 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 WDR26Q9H7D7 661 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 KIF9Q9HAQ2 790 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 PLSCR4Q9NRQ2 329 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 NRBP1Q9UHY1 535 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 AAR2Q9Y312 384 aaKnown RBP4.22□□□□□ -1.73
PTCH1-216ENST00000548379 NUP155O75694 1391 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 PNPLA6Q8IY17 1366 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 NWD1Q149M9 1564 aa4.22□□□□□ -1.73
PTCH1-216ENST00000548379 RGS12O14924 1447 aa4.21□□□□□ -1.73
PTCH1-216ENST00000548379 PIK3C2BO00750 1634 aa4.21□□□□□ -1.73
PTCH1-216ENST00000548379 MROH1Q8NDA8 1641 aa4.21□□□□□ -1.73
PTCH1-216ENST00000548379 UBR1Q8IWV7 1749 aa4.21□□□□□ -1.73
PTCH1-216ENST00000548379 CDRT15L2A8MXV6 281 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 I6L893 689 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 WNT9BO14905 357 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 HCRTR2O43614 444 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 GJB3O75712 270 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 IPO7O95373 1038 aaKnown RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 CSH1P0DML2 217 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 CSH2P0DML3 217 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ARSBP15848 533 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 TBXAS1P24557 533 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 PPARGP37231 505 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 RAD52P43351 418 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ME1P48163 572 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 COMPP49747 757 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 F2RL1P55085 397 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ZP1P60852 638 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 GOLGA8DPQ0D2H9 430 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ST3GAL1Q11201 340 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 EPS8Q12929 822 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 KLF9Q13886 244 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 CRYMQ14894 314 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 DRAP1Q14919 205 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 TWIST1Q15672 202 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ZNF284Q2VY69 593 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ODF3L2Q3SX64 289 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 DCAF6Q58WW2 860 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 PLEKHS1Q5SXH7 462 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 C6orf141Q5SZD1 244 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 GLDNQ6ZMI3 551 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 GSTA5Q7RTV2 222 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 TRAPPC11Q7Z392 1133 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 WDR63Q8IWG1 891 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ZCCHC9Q8N567 271 aaKnown RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 CCDC89Q8N998 374 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ZNF548Q8NEK5 533 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 BEST2Q8NFU1 509 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 HUS1BQ8NHY5 278 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 SGCDQ92629 289 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ARHGEF26Q96DR7 871 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ZC3HAV1LQ96H79 300 aaKnown RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 PGAM5Q96HS1 289 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 URB1-AS1Q96HZ7 61 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 POLDIP3Q9BY77 421 aaKnown RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 SPRTNQ9H040 489 aaPredicted RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 KAT14Q9H8E8 782 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ADD3Q9UEY8 706 aaKnown RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 CNOT8Q9UFF9 292 aaKnown RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 RABGAP1Q9Y3P9 1069 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 CEPT1Q9Y6K0 416 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 LRPPRCP42704 1394 aaKnown RBP4.21□□□□□ -1.74
PTCH1-216ENST00000548379 TRPM2O94759 1503 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 ADAMTS13Q76LX8 1427 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 NPHP3Q7Z494 1330 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 PASKQ96RG2 1323 aa4.21□□□□□ -1.74
PTCH1-216ENST00000548379 IGLV5-39A0A0G2JS06 123 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 hCG_1807616A0A1W2PRN6 198 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 TIMM44O43615 452 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 RGS11O94810 467 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 HOXA13P31271 388 aaPredicted RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 ACSL1P33121 698 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 MMP13P45452 471 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 WTAPQ15007 396 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 C2orf68Q2NKX9 166 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 RAB41Q5JT25 222 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 WASHC2DQ5SRD0 308 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 MANEAQ5SRI9 462 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 DCAF12L2Q5VW00 463 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 HIST2H2BCQ6DN03 193 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 HIST2H2BDQ6DRA6 164 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 CES5AQ6NT32 575 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 C11orf87Q6NUJ2 197 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 ANKRD54Q6NXT1 300 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 TMEM154Q6P9G4 183 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 FBXO46Q6PJ61 603 aaPredicted RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 MTSS1LQ765P7 747 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 CHST9Q7L1S5 443 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 MRPL10Q7Z7H8 261 aaKnown RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 MB21D2Q8IYB1 491 aaPredicted RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 ZBTB2Q8N680 514 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 NANOGP1Q8N7R0 232 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
PTCH1-216ENST00000548379 TMEM68Q96MH6 324 aa4.2□□□□□ -1.74
PTCH1-216ENST00000548379 NUDT16L1Q9BRJ7 211 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms