RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PKNOX2Q96KN3 472 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 NUDCD1Q96RS6 583 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 NAT9Q9BTE0 207 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 HDAC8Q9BY41 377 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 ROPN1BQ9BZX4 212 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 ROPN1Q9HAT0 212 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SCUBE2Q9NQ36 999 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 SYBUQ9NX95 663 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 PCDHGC4Q9Y5F7 938 aa17.44■□□□□ 0.38
HDAC7-227ENST00000548080 GVINP1Q7Z2Y8 2422 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 PI4KAP42356 2102 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 ADAMTS9Q9P2N4 1935 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 MAGEB16A2A368 324 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 GOLGA6L10A6NI86 522 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 LRRC72A6NJI9 287 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 METTL12A8MUP2 240 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 SPINT1O43278 529 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 TCEA3O75764 348 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 MYZAPP0CAP1 466 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 KRT71Q3SY84 523 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 KIAA0895LQ68EN5 471 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 FOXJ1Q92949 421 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 LOXL4Q96JB6 756 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 OSBPL1AQ9BXW6 950 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 CPEB1Q9BZB8 566 aaKnown RBP17.43■□□□□ 0.38
HDAC7-227ENST00000548080 IL22Q9GZX6 179 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 SUV39H2Q9H5I1 410 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 ATP13A3Q9H7F0 1226 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 EBF2Q9HAK2 575 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 ARNT2Q9HBZ2 717 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 SAMD15Q9P1V8 674 aa17.43■□□□□ 0.38
HDAC7-227ENST00000548080 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.43■□□□□ 0.38
HDAC7-227ENST00000548080 PTPRZ1P23471 2315 aaPredicted RBP17.43■□□□□ 0.38
HDAC7-227ENST00000548080 PIEZO1Q92508 2521 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 ZNF292O60281 2723 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 LOC285095A0A1B0GVY8 99 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 RNGTTO60942 597 aaKnown RBP17.42■□□□□ 0.38
HDAC7-227ENST00000548080 PCDH8O95206 1070 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 EPOP01588 193 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 TIMP2P16035 220 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 TPH1P17752 444 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 PGAM1P18669 254 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 CSNK1DP48730 415 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 CRADDP78560 199 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 BCL2L1Q07817 233 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 RALGPS1Q5JS13 557 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 CERCAMQ5T4B2 595 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 LAYNQ6UX15 382 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 UNC5AQ6ZN44 842 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 KDELC2Q7Z4H8 507 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 CADM4Q8NFZ8 388 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 PDCD6IPQ8WUM4 868 aaKnown RBP17.42■□□□□ 0.38
HDAC7-227ENST00000548080 LRIG1Q96JA1 1093 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 FEM1CQ96JP0 617 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 MYOCQ99972 504 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 TMBIM4Q9HC24 238 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 OGFRQ9NZT2 677 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 RABGEF1Q9UJ41 708 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 PILRBQ9UKJ0 227 aa17.42■□□□□ 0.38
HDAC7-227ENST00000548080 GOLGA8KD6RF30 607 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 H3BQF6 201 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 RASGRF2O14827 1237 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 SLC7A4O43246 635 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 IVLP07476 585 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 SERPINA4P29622 427 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 AP1S1P61966 158 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 CDK18Q07002 472 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 TRAF2Q12933 501 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 STEAP4Q687X5 459 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 SEL1L3Q68CR1 1132 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 TTC7BQ86TV6 843 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 SYT12Q8IV01 421 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 KIAA2013Q8IYS2 634 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 SLC25A41Q8N5S1 370 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 FBF1Q8TES7 1133 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 IFT43Q96FT9 208 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 PLAC1Q9HBJ0 212 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 SEMA4GQ9NTN9 838 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 ZFR2Q9UPR6 939 aaKnown RBP17.41■□□□□ 0.38
HDAC7-227ENST00000548080 FADS3Q9Y5Q0 445 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 TRPM6Q9BX84 2022 aa17.41■□□□□ 0.38
HDAC7-227ENST00000548080 LAMA1P25391 3075 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 EXOC1LA0A1B0GW35 172 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 A0A1W2PQU0 124 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 TLDC2A0PJX2 215 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 NEMP1O14524 444 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 CFIP05156 583 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 TGM1P22735 817 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 STX2P32856 288 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 PTPRRQ15256 657 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 SLC1A5Q15758 541 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 WDR45BQ5MNZ6 344 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 PLA2G2CQ5R387 149 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 KRT222Q8N1A0 295 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 GSDMBQ8TAX9 411 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 EPS8L3Q8TE67 593 aaKnown RBP17.4■□□□□ 0.38
HDAC7-227ENST00000548080 ARL8AQ96BM9 186 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 TUBGCP5Q96RT8 1024 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 ACSS3Q9H6R3 686 aa17.4■□□□□ 0.38
HDAC7-227ENST00000548080 FZD3Q9NPG1 666 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms