RNA–Protein interactions for RNA: ENST00000547061.5

RACGAP1-208, Transcript of Rac GTPase activating protein 1, human

TSL 3

Gene RACGAP1, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-208	ENST00000547061	ZCCHC8	Q6NZY4	707 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	C22orf34	Q6ZV56	151 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PARG	Q86W56	976 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	VSIG1	Q86XK7	387 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	DNAAF5	Q86Y56	855 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	MCAT	Q8IVS2	390 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	CBARP	Q8N350	705 aa	Predicted RBP	6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	NIPA2	Q8N8Q9	360 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	OR2I1P	Q8NGU4	316 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ATL2	Q8NHH9	583 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	SLC30A5	Q8TAD4	765 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FAM71B	Q8TC56	605 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FAM172A	Q8WUF8	416 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	NAT6	Q93015	286 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ECHDC3	Q96DC8	303 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	NXPE2	Q96DL1	559 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	CNDP2	Q96KP4	475 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	BMF	Q96LC9	184 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	SELENOO	Q9BVL4	669 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ISCU	Q9H1K1	167 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	NOL6	Q9H6R4	1146 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	LRRC19	Q9H756	370 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FSCN3	Q9NQT6	498 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TAB2	Q9NYJ8	693 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	HECA	Q9UBI9	543 aa	Predicted RBP	6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FZD10	Q9ULW2	581 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ZFR2	Q9UPR6	939 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	BTBD3	Q9Y2F9	522 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	DGKB	Q9Y6T7	804 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	SCIN	Q9Y6U3	715 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FREM2	Q5SZK8	3169 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	CFAP47	Q6ZTR5	3102 aa		6.5	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FRY	Q5TBA9	3013 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	EME2	A4GXA9	379 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TRABD2B	A6NFA1	517 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FAM47DP	A6NHR8	397 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ZNF487	B1APH4	448 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	LMO7DN	F2Z398	122 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061		H3BS24	57 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061		K7ERQ8	282 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PES1	O00541	588 aa	Known RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	WNT9A	O14904	365 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	EPHB6	O15197	1021 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PRAMEF11	O60813	436 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	RNF8	O76064	485 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	IGSF6	O95976	241 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TOP3B	O95985	862 aa	Known RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PNMA6A	P0CW24	399 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	THEGL	P0DJG4	465 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	JUP	P14923	745 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	EPHB2	P29323	1055 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	HNRNPH3	P31942	346 aa	Known RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TRIM23	P36406	574 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	LSS	P48449	732 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PEX6	Q13608	980 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PIGH	Q14442	188 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	DPYSL2	Q16555	572 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	UGP2	Q16851	508 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TAF3	Q5VWG9	929 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	DNAJC24	Q6P3W2	148 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	GDPD4	Q6W3E5	623 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	GCNT7	Q6ZNI0	430 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061		Q6ZSR6	202 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TFAP2D	Q7Z6R9	452 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	CDH24	Q86UP0	819 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	CIR1	Q86X95	450 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PHACTR4	Q8IZ21	702 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FSTL5	Q8N475	847 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	OR7D4	Q8NG98	312 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	SLC20A1	Q8WUM9	679 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TEKT4	Q8WW24	435 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ARRDC3	Q96B67	414 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TMEM159	Q96B96	161 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ZNF578	Q96N58	590 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PSKH2	Q96QS6	385 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	SPON2	Q9BUD6	331 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	BOC	Q9BWV1	1114 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PDF	Q9HBH1	243 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	METTL5	Q9NRN9	209 aa	Known RBP	6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	HAUS2	Q9NVX0	235 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ACSL6	Q9UKU0	697 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PPIL1	Q9Y3C6	166 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PCDHGA8	Q9Y5G5	932 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061		U3KQE9	123 aa		6.49	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ACACA	Q13085	2346 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	SYNJ2BP-COX16	A0A087WUM0	186 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ARHGAP42	A6NI28	874 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	RASA4B	C9J798	803 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	FAM72C	H0Y354	149 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	GOLGA8S	H3BPF8	625 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PSMD11	O00231	422 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	RASA4	O43374	803 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	HTRA2	O43464	458 aa	Predicted RBP	6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	SOCS5	O75159	536 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TM7SF2	O76062	418 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PCDH8	O95206	1070 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	PAK4	O96013	591 aa	Predicted RBP	6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	TNFAIP3	P21580	790 aa		6.48	□□□□□ -1.37
RACGAP1-208	ENST00000547061	ACTN2	P35609	894 aa		6.48	□□□□□ -1.37

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