RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 GOLGA8CPA6NN73 597 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 PDE2AO00408 941 aaPredicted RBP16.78■□□□□ 0.28
CCDC38-203ENST00000546803 ETS1P14921 441 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 HTR1BP28222 390 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 CASQ1P31415 396 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 RPL22P35268 128 aaKnown RBP16.78■□□□□ 0.28
CCDC38-203ENST00000546803 TRIM23P36406 574 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 COILP38432 576 aaPredicted RBP16.78■□□□□ 0.28
CCDC38-203ENST00000546803 PAFAH1B1P43034 410 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 FNTAP49354 379 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 CCT8P50990 548 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 SEMA5AQ13591 1074 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 PDE1CQ14123 709 aaPredicted RBP16.78■□□□□ 0.28
CCDC38-203ENST00000546803 FAXCQ5TGI0 409 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 LINC00523Q86TU6 105 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 CREG2Q8IUH2 290 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 SLC22A18ASQ8N1D0 253 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 AP2M1Q96CW1 435 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 IL21RQ9HBE5 538 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 ETNK1Q9HBU6 452 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 RAB6BQ9NRW1 208 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 TM7SF3Q9NS93 570 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 SMARCAL1Q9NZC9 954 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 FNDC3AQ9Y2H6 1198 aaKnown RBP16.78■□□□□ 0.28
CCDC38-203ENST00000546803 SPO11Q9Y5K1 396 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 GON4LQ3T8J9 2241 aa16.78■□□□□ 0.28
CCDC38-203ENST00000546803 PIEZO1Q92508 2521 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 RIF1Q5UIP0 2472 aaKnown RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 FAM186AA6NE01 2351 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 E7EVH7 732 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 CACNB4O00305 520 aaPredicted RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 FANCGO15287 622 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 PCDHGA12O60330 932 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 PHF2O75151 1096 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 ZSCAN5DPP0CG00 497 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 HMGCLP35914 325 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 FZD2Q14332 565 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 NFATC4Q14934 902 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 SUZ12Q15022 739 aaKnown RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 RSPO4Q2I0M5 234 aaPredicted RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 UAP1L1Q3KQV9 507 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 ZDHHC20Q5W0Z9 365 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 TTC27Q6P3X3 843 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 CCDC137Q6PK04 289 aaKnown RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 MACC1Q6ZN28 852 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 RFLNAQ6ZTI6 216 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 PARGQ86W56 976 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 PDCD7Q8N8D1 485 aaKnown RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 GLIS1Q8NBF1 620 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 PLA2G15Q8NCC3 412 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 BLOC1S5Q8TDH9 187 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 GRK7Q8WTQ7 553 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 EID2BQ96D98 161 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 APOL2Q9BQE5 337 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 RTKNQ9BST9 563 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 FAM83DQ9H4H8 585 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 WDR26Q9H7D7 661 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 PHPT1Q9NRX4 125 aaPredicted RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 NFKBIL1Q9UBC1 381 aaPredicted RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 OR1A2Q9Y585 309 aa16.77■□□□□ 0.28
CCDC38-203ENST00000546803 PTPRZ1P23471 2315 aaPredicted RBP16.77■□□□□ 0.28
CCDC38-203ENST00000546803 PPFIA2O75334 1257 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 SUN1O94901 812 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 KELP23276 732 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 GPR1P46091 355 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 LMAN1P49257 510 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 KIAA1024LP59773 190 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 DCDC1P59894 354 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 SPARCL1Q14515 664 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 PRAMEF14Q5SWL7 426 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 RAET1GQ6H3X3 334 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 DENND5AQ6IQ26 1287 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 SYT10Q6XYQ8 523 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 NYAP1Q6ZVC0 841 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 GLT6D1Q7Z4J2 308 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 PRUNE1Q86TP1 453 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 TTC30BQ8N4P2 665 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 TAB3Q8N5C8 712 aaPredicted RBP16.76■□□□□ 0.27
CCDC38-203ENST00000546803 BRSK1Q8TDC3 778 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 SCAMP4Q969E2 229 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 CAPZA3Q96KX2 299 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 RIOK2Q9BVS4 552 aaKnown RBP16.76■□□□□ 0.27
CCDC38-203ENST00000546803 TEX101Q9BY14 249 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 CD84Q9UIB8 345 aa16.76■□□□□ 0.27
CCDC38-203ENST00000546803 CEP192Q8TEP8 1941 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.75■□□□□ 0.27
CCDC38-203ENST00000546803 H3BM21 787 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 K7ESM1 405 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 TNFRSF10CO14798 259 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 TM4SF5O14894 197 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 AURKAO14965 403 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 USP12O75317 370 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 GAS8O95995 478 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 CSF2P04141 144 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 TUBB4AP04350 444 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 HNRNPKP61978 463 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCDC38-203ENST00000546803 PDE1BQ01064 536 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 OLIG2Q13516 323 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 SHBQ15464 509 aa16.75■□□□□ 0.27
CCDC38-203ENST00000546803 TAF1AQ15573 450 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms