RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 BCAS2O75934 225 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 EPB42P16452 691 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 MPSTP25325 297 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 ATN1P54259 1190 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 SLC18A2Q05940 514 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 RFTN2Q52LD8 501 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 ARL13AQ5H913 290 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 VWA5B1Q5TIE3 1220 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 OR5K1Q8NHB7 308 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 SEMA4DQ92854 862 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 ZDHHC15Q96MV8 337 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 HSD17B14Q9BPX1 270 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 POLR1EQ9GZS1 481 aaKnown RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 WDR55Q9H6Y2 383 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 STOX2Q9P2F5 926 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 MTRRQ9UBK8 725 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 A0A0G2JPF8 293 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 EFCAB9A8MZ26 197 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 HNRNPCL3B7ZW38 293 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 E5RJQ4 531 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 KPNA5O15131 536 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 APOL3O95236 402 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 HNRNPCL4P0DMR1 293 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 COX7A2P14406 83 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 HTR7P34969 479 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 SLC15A1P46059 708 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 LIPEQ05469 1076 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 EIF2B5Q13144 721 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 LSM12Q3MHD2 195 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 SLC41A1Q8IVJ1 513 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 IZUMO1Q8IYV9 350 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 DNERQ8NFT8 737 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 RACGAP1Q9H0H5 632 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 MMP27Q9H306 513 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 SLC9A8Q9Y2E8 581 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 VWA7Q9Y334 891 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 GRIP1Q9Y3R0 1128 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 GCATO75600 419 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 TPH1P17752 444 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 NELFEP18615 380 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 SULT2A1Q06520 285 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 TDRD10Q5VZ19 366 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 AFTPHQ6ULP2 937 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 GK5Q6ZS86 529 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 ADCK2Q7Z695 626 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 SPPL2CQ8IUH8 684 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 AASSQ9UDR5 926 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 VPS4AQ9UN37 437 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 DGKBQ9Y6T7 804 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 TJP1Q07157 1748 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 NUP188Q5SRE5 1749 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 BTAF1O14981 1849 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 EME2A4GXA9 379 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 METTL21EPA6NDL7 271 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 H3BSA7 217 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 WWP2O00308 870 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 TBX1O43435 398 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 FADS2O95864 444 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 PGK1P00558 417 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 CALCAP01258 141 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 CES1P23141 567 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 TCF7P36402 384 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 SH3D19Q5HYK7 790 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 LYPLAL1Q5VWZ2 237 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 GATAD2AQ86YP4 633 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 TNS4Q8IZW8 715 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 ASCC1Q8N9N2 400 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 SELENOMQ8WWX9 145 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 LENG9Q96B70 501 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 CPB2Q96IY4 423 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 HTATIP2Q9BUP3 242 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 GATA5Q9BWX5 397 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 SDCBP2Q9H190 292 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 PRDM12Q9H4Q4 367 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 CCDC189A1A4V9 331 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 CASKO14936 926 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 IL1BP01584 269 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 EIF5AP63241 154 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 NFIAQ12857 509 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 MYBPC3Q14896 1274 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 DALRD3Q5D0E6 543 aaKnown RBP12.79□□□□□ -0.36
PTCH1-212ENST00000546744 BORAQ6PGQ7 559 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 CES3Q6UWW8 571 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 PTCHD4Q6ZW05 846 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 MON1BQ7L1V2 547 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 GJD3Q8N144 294 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 EFCAB3Q8N7B9 438 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 UXS1Q8NBZ7 420 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 TMEM161BQ8NDZ6 487 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 NSMCE3Q96MG7 304 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 FBXO44Q9H4M3 255 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 EXD2Q9NVH0 621 aa12.79□□□□□ -0.36
PTCH1-212ENST00000546744 MLXQ9UH92 298 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms