RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CASQ1P31415 396 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 FDFT1P37268 417 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 CCT8P50990 548 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 IL9RQ01113 521 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 SUZ12Q15022 739 aaKnown RBP16.8■□□□□ 0.28
LTBR-215ENST00000546296 CDKN3Q16667 212 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 RANBP10Q6VN20 620 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 PRUNE1Q86TP1 453 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 SLC22A18ASQ8N1D0 253 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 BLOC1S5Q8TDH9 187 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 AP2M1Q96CW1 435 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 ABCG8Q9H221 673 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 TRABDQ9H4I3 376 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 LRRC40Q9H9A6 602 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 ETNK1Q9HBU6 452 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 RAB6BQ9NRW1 208 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 TM7SF3Q9NS93 570 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 HACD3Q9P035 362 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 SPO11Q9Y5K1 396 aa16.8■□□□□ 0.28
LTBR-215ENST00000546296 A0A1B0GTQ1 180 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 RGSL1A5PLK6 1076 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 CACNB4O00305 520 aaPredicted RBP16.79■□□□□ 0.28
LTBR-215ENST00000546296 SLC30A4O14863 429 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 USP12O75317 370 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 TSHRP16473 764 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 HTR1BP28222 390 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 RPL22P35268 128 aaKnown RBP16.79■□□□□ 0.28
LTBR-215ENST00000546296 ADRA1AP35348 466 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 GPR1P46091 355 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 SPINT3P49223 89 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 ETF1P62495 437 aaKnown RBP16.79■□□□□ 0.28
LTBR-215ENST00000546296 SLC14A1Q13336 389 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 OLIG2Q13516 323 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 RAET1GQ6H3X3 334 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 ESRP1Q6NXG1 681 aaKnown RBP16.79■□□□□ 0.28
LTBR-215ENST00000546296 C4orf22Q6V702 233 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 TMC3Q7Z5M5 1100 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 RAVER1Q8IY67 606 aaKnown RBP16.79■□□□□ 0.28
LTBR-215ENST00000546296 PDCD7Q8N8D1 485 aaKnown RBP16.79■□□□□ 0.28
LTBR-215ENST00000546296 RIOK2Q9BVS4 552 aaKnown RBP16.79■□□□□ 0.28
LTBR-215ENST00000546296 FAM83DQ9H4H8 585 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 WDR26Q9H7D7 661 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 RAD18Q9NS91 495 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 DNAJC28Q9NX36 388 aa16.79■□□□□ 0.28
LTBR-215ENST00000546296 SPTY2D1-AS1A0A0U1RR47 76 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 K7ESM1 405 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 YKT6O15498 198 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 AP2A1O95782 977 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 ZNF883P0CG24 379 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 COILP38432 576 aaPredicted RBP16.78■□□□□ 0.28
LTBR-215ENST00000546296 PAFAH1B1P43034 410 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 DPTQ07507 201 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 FZD2Q14332 565 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 HS1BP3Q53T59 392 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 ZNF542PQ5EBM4 170 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 TTC27Q6P3X3 843 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 SYT10Q6XYQ8 523 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 ZNF765Q7L2R6 523 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 GLT6D1Q7Z4J2 308 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 GLIS1Q8NBF1 620 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 SCAMP4Q969E2 229 aa16.78■□□□□ 0.28
LTBR-215ENST00000546296 PHPT1Q9NRX4 125 aaPredicted RBP16.78■□□□□ 0.28
LTBR-215ENST00000546296 FEZ2Q9UHY8 353 aaPredicted RBP16.78■□□□□ 0.28
LTBR-215ENST00000546296 ERI2A8K979 691 aaKnown RBP16.77■□□□□ 0.28
LTBR-215ENST00000546296 PDE2AO00408 941 aaPredicted RBP16.77■□□□□ 0.28
LTBR-215ENST00000546296 AURKAO14965 403 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 PHF2O75151 1096 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 PYGLP06737 847 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 KELP23276 732 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 TRIM23P36406 574 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 PI4KAP42356 2102 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 RXRGP48443 463 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 NFATC4Q14934 902 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 TRIP13Q15645 432 aaPredicted RBP16.77■□□□□ 0.28
LTBR-215ENST00000546296 CYP1B1Q16678 543 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 TPRG1LQ5T0D9 272 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 ALS2CLQ60I27 953 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 KCTD11Q693B1 232 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 CCDC137Q6PK04 289 aaKnown RBP16.77■□□□□ 0.28
LTBR-215ENST00000546296 ENPP7Q6UWV6 458 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 MACC1Q6ZN28 852 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 LINC00523Q86TU6 105 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 NLRP8Q86W28 1048 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 PARGQ86W56 976 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 KLHDC8BQ8IXV7 354 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 PELI3Q8N2H9 469 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 SETD7Q8WTS6 366 aaKnown RBP16.77■□□□□ 0.28
LTBR-215ENST00000546296 FUBP1Q96AE4 644 aaKnown RBP16.77■□□□□ 0.28
LTBR-215ENST00000546296 EID2BQ96D98 161 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 RTKNQ9BST9 563 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 BPIFA1Q9NP55 256 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 GPR27Q9NS67 375 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 PCDHGB2Q9Y5G2 931 aa16.77■□□□□ 0.28
LTBR-215ENST00000546296 PCDH15Q96QU1 1955 aa16.77■□□□□ 0.27
LTBR-215ENST00000546296 C2orf81A6NN90 581 aa16.76■□□□□ 0.27
LTBR-215ENST00000546296 GAS8O95995 478 aa16.76■□□□□ 0.27
LTBR-215ENST00000546296 KRT14P02533 472 aa16.76■□□□□ 0.27
LTBR-215ENST00000546296 APRTP07741 180 aa16.76■□□□□ 0.27
LTBR-215ENST00000546296 HOXC4P09017 264 aaPredicted RBP16.76■□□□□ 0.27
LTBR-215ENST00000546296 CD59P13987 128 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms