RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 DDX3XO00571 662 aaKnown RBP eCLIP12.54□□□□□ -0.44e-6■■■■■ 27.3
COPS7A-221ENST00000546229 HGSO14964 777 aaPredicted RBP12.54□□□□□ -0.4
COPS7A-221ENST00000546229 PPM1DO15297 605 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 SUV39H1O43463 412 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 FZD6O60353 706 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 ECEL1O95672 775 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 CPP00450 1065 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 IVLP07476 585 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 THRAP10827 490 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 CD82P27701 267 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 PRKCIP41743 596 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 CSRP3P50461 194 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 SCNN1BP51168 640 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 CYP4F2P78329 520 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 DPTQ07507 201 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 ACOX1Q15067 660 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 TXNRD3NBQ6F5E7 133 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 ZNF571Q7Z3V5 609 aaPredicted RBP12.54□□□□□ -0.4
COPS7A-221ENST00000546229 POLNQ7Z5Q5 900 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 BMPERQ8N8U9 685 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 RCBTB1Q8NDN9 531 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 CCDC74BQ96LY2 380 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 SMIM14Q96QK8 99 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 CMKLR1Q99788 373 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 SPRY4Q9C004 299 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 TRIM4Q9C037 500 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 DPEP2Q9H4A9 486 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 TMEM9Q9P0T7 183 aa12.54□□□□□ -0.4
COPS7A-221ENST00000546229 IGHV1OR21-1A0A087WYE8 117 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.53□□□□□ -0.4
COPS7A-221ENST00000546229 LRRC53A6NM62 1247 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 PSMD11O00231 422 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 AGRPO00253 132 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 PGLSO95336 258 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 EML2O95834 649 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 PCK1P35558 622 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 ADCY8P40145 1251 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 GPR3P46089 330 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 POLD2P49005 469 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 ZNF135P52742 658 aaPredicted RBP12.53□□□□□ -0.4
COPS7A-221ENST00000546229 LIMK2P53671 638 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 MAPK10P53779 464 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 POLR2LP62875 67 aaKnown RBP12.53□□□□□ -0.4
COPS7A-221ENST00000546229 CTBSQ01459 385 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 SLC25A11Q02978 314 aaKnown RBP12.53□□□□□ -0.4
COPS7A-221ENST00000546229 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
COPS7A-221ENST00000546229 MAP9Q49MG5 647 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 PPP6R3Q5H9R7 873 aaPredicted RBP12.53□□□□□ -0.4
COPS7A-221ENST00000546229 PHF19Q5T6S3 580 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 ALG1LQ6GMV1 187 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 Q6ZVL8 140 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 USP53Q70EK8 1073 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 LZTR1Q8N653 840 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 KIAA1524Q8TCG1 905 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 ZDHHC1Q8WTX9 485 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 PIH1D2Q8WWB5 315 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 NKD1Q969G9 470 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 CSPG4P5Q96PW8 444 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 GSDMCQ9BYG8 508 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 PDP2Q9P2J9 529 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 PLEKHM1Q9Y4G2 1056 aa12.53□□□□□ -0.4
COPS7A-221ENST00000546229 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 TPM2P07951 284 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 PDHA1P08559 390 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 GZMAP12544 262 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 IL4RP24394 825 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 HSPA9P38646 679 aaKnown RBP12.52□□□□□ -0.41
COPS7A-221ENST00000546229 GNPDA1P46926 289 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 FASLGP48023 281 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 RENBPP51606 427 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 MAXP61244 160 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 KCNC4Q03721 635 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 ARHGEF7Q14155 803 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 STX1AQ16623 288 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 MANEAQ5SRI9 462 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 SLC30A9Q6PML9 568 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 ADAMTSL4Q6UY14 1074 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 PRICKLE2Q7Z3G6 844 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 PIM3Q86V86 326 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 OR4D9Q8NGE8 314 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 FAM71BQ8TC56 605 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 SCRN2Q96FV2 425 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 COX14Q96I36 57 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 WDR24Q96S15 920 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 HAUS4Q9H6D7 363 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
COPS7A-221ENST00000546229 PHPT1Q9NRX4 125 aaPredicted RBP12.52□□□□□ -0.41
COPS7A-221ENST00000546229 AIPL1Q9NZN9 384 aa12.52□□□□□ -0.41
COPS7A-221ENST00000546229 ZNF106Q9H2Y7 1883 aaKnown RBP12.52□□□□□ -0.41
COPS7A-221ENST00000546229 USP9XQ93008 2570 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-221ENST00000546229 A0A1W2PQ67 120 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 A6NCN8 305 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 STMND1H3BQB6 276 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 PDE2AO00408 941 aaPredicted RBP12.51□□□□□ -0.41
COPS7A-221ENST00000546229 ARHGAP6O43182 974 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 PRPSAP2O60256 369 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 AMPD1P23109 780 aa12.51□□□□□ -0.41
COPS7A-221ENST00000546229 ILF3Q12906 894 aaKnown RBP eCLIP12.51□□□□□ -0.41
COPS7A-221ENST00000546229 TRA2AQ13595 282 aaKnown RBP eCLIP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms