RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	MUS81	Q96NY9	551 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	CSF3R	Q99062	836 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	KCTD14	Q9BQ13	255 aa	Predicted RBP	10.18	□□□□□ -0.78
UBC-213	ENST00000546120	CHID1	Q9BWS9	393 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	EMILIN2	Q9BXX0	1053 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	MKRN2	Q9H000	416 aa	Known RBP	10.18	□□□□□ -0.78
UBC-213	ENST00000546120	C2orf40	Q9H1Z8	148 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	PORCN	Q9H237	461 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	ADNP	Q9H2P0	1102 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	MAGIX	Q9H6Y5	334 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	SYTL2	Q9HCH5	934 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	DDX4	Q9NQI0	724 aa	Known RBP	10.18	□□□□□ -0.78
UBC-213	ENST00000546120	COMMD8	Q9NX08	183 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	DNMT3B	Q9UBC3	853 aa	Known RBP	10.18	□□□□□ -0.78
UBC-213	ENST00000546120	VPS51	Q9UID3	782 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	SERPINA10	Q9UK55	444 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	PACSIN3	Q9UKS6	424 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	VANGL2	Q9ULK5	521 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	KCNH4	Q9UQ05	1017 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	RUVBL2	Q9Y230	463 aa	Known RBP	10.18	□□□□□ -0.78
UBC-213	ENST00000546120	BCS1L	Q9Y276	419 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	PCDHB3	Q9Y5E6	796 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	PCDHGB2	Q9Y5G2	931 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120	PCDHA9	Q9Y5H5	950 aa		10.18	□□□□□ -0.78
UBC-213	ENST00000546120		A0A1W2PP18	115 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	TCRBV5S2	A0A599	114 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	UNCX	A6NJT0	531 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	PPEF1	O14829	653 aa	Predicted RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	STX7	O15400	261 aa	Known RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	TEX28	O15482	410 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	PDPK1	O15530	556 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	KCNQ2	O43526	872 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	DLX3	O60479	287 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	FOXD2	O60548	495 aa	Predicted RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	PRKD3	O94806	890 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	DLGAP3	O95886	979 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	EGFR	P00533	1210 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	CHRNG	P07510	517 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	CD19	P15391	556 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	NELFE	P18615	380 aa	Known RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ATP6V1B2	P21281	511 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	PCMT1	P22061	227 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	GPX3	P22352	226 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	FGFR3	P22607	806 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	PRKACB	P22694	351 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	HTR1B	P28222	390 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	AXL	P30530	894 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	CA8	P35219	290 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	PTGER2	P43116	358 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	HCAR3	P49019	387 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	SLC12A2	P55011	1212 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	TEK	Q02763	1124 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	CHRNB3	Q05901	458 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	BAMBI	Q13145	260 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	TIMM50	Q3ZCQ8	353 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	GK5	Q6ZS86	529 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ZBTB33	Q86T24	672 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	RETREG3	Q86VR2	466 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	KCNMB4	Q86W47	210 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	LDHD	Q86WU2	507 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	SPPL2C	Q8IUH8	684 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ADHFE1	Q8IWW8	467 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	RIMKLA	Q8IXN7	391 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	SP8	Q8IXZ3	490 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	MPP5	Q8N3R9	675 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	FSTL5	Q8N475	847 aa	Predicted RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	LSMEM1	Q8N8F7	131 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	OR6F1	Q8NGZ6	308 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ZFP90	Q8TF47	636 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	GLMN	Q92990	594 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ZHX1-C8orf76	Q96EF9	292 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	L3HYPDH	Q96EM0	354 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	NSMCE2	Q96MF7	247 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	CCDC115	Q96NT0	180 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ZNF300	Q96RE9	604 aa	Predicted RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	CLSTN3	Q9BQT9	956 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	KIFC1	Q9BW19	673 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	LRRC3	Q9BY71	257 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	MRPL4	Q9BYD3	311 aa	Known RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	PRKD2	Q9BZL6	878 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	NAA50	Q9GZZ1	169 aa	Known RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	FAM49A	Q9H0Q0	323 aa	Predicted RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ALG2	Q9H553	416 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	DUSP21	Q9H596	190 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	NOL6	Q9H6R4	1146 aa	Known RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	GORASP2	Q9H8Y8	452 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	PLEKHA5	Q9HAU0	1116 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	SDR39U1	Q9NRG7	319 aa	Predicted RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	SACM1L	Q9NTJ5	587 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	FAM118A	Q9NWS6	357 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	CCDC167	Q9P0B6	97 aa		10.17	□□□□□ -0.78
UBC-213	ENST00000546120	LEF1	Q9UJU2	399 aa	Predicted RBP	10.17	□□□□□ -0.78
UBC-213	ENST00000546120	ZCWPW2	A0A1B0GU75	182 aa		10.16	□□□□□ -0.78
UBC-213	ENST00000546120	PABPN1L	A6NDY0	278 aa	Known RBP	10.16	□□□□□ -0.78
UBC-213	ENST00000546120		G3V2T6	193 aa		10.16	□□□□□ -0.78
UBC-213	ENST00000546120	PLK4	O00444	970 aa		10.16	□□□□□ -0.78
UBC-213	ENST00000546120	NME4	O00746	187 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms