RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 BIN1O00499 593 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 HTRA2O43464 458 aaPredicted RBP14.69□□□□□ -0.06
RTN3-214ENST00000545432 STK17BO94768 372 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 F8A1P23610 371 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 ERCC5P28715 1186 aaPredicted RBP14.69□□□□□ -0.06
RTN3-214ENST00000545432 MAN1A1P33908 653 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 HTR7P34969 479 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 RFC1P35251 1148 aaPredicted RBP14.69□□□□□ -0.06
RTN3-214ENST00000545432 BCL2L1Q07817 233 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 KLHDC7AQ5VTJ3 777 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 TAF3Q5VWG9 929 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 HEATR4Q86WZ0 1026 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 FAM129CQ86XR2 697 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 ZNF354CQ86Y25 554 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 CCDC13Q8IYE1 715 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 SFRP1Q8N474 314 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 TEX19Q8NA77 164 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 CATSPERBQ9H7T0 1116 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 MOSPD1Q9UJG1 213 aa14.69□□□□□ -0.06
RTN3-214ENST00000545432 NOCTQ9UK39 431 aaKnown RBP14.69□□□□□ -0.06
RTN3-214ENST00000545432 MKRN2OSH3BPM6 223 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 FGF10O15520 208 aaPredicted RBP14.68□□□□□ -0.06
RTN3-214ENST00000545432 TEX33O43247 280 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 NR1D1P20393 614 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 UQCRFS1P47985 274 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 AIF1P55008 147 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 CDK3Q00526 305 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 DPTQ07507 201 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 MAN2A1Q16706 1144 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 MIIPQ5JXC2 388 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 CFAP58Q5T655 872 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 ATP1A1-AS1Q5TC04 95 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 FHL5Q5TD97 284 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 WDR59Q6PJI9 974 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 SLC30A9Q6PML9 568 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 NLRP8Q86W28 1048 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 NRSN1Q8IZ57 195 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 ESX1Q8N693 406 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 SSC4DQ8WTU2 575 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 DTD2Q96FN9 168 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 STK33Q9BYT3 514 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 NDST4Q9H3R1 872 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 APMAPQ9HDC9 416 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 DONSONQ9NYP3 566 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 B4GALT6Q9UBX8 382 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 FZD10Q9ULW2 581 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 FHOD1Q9Y613 1164 aa14.68□□□□□ -0.06
RTN3-214ENST00000545432 DOPEY1Q5JWR5 2465 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 A0A1W2PQ67 120 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 TCRBV5S1A1TA0A578 114 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 PSMD11O00231 422 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 HEXIM1O94992 359 aaKnown RBP14.67□□□□□ -0.06
RTN3-214ENST00000545432 KRT3P12035 628 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 UCHL3P15374 230 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 CHRNB2P17787 502 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 GNPDA1P46926 289 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 FMO1Q01740 532 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 RFTN1Q14699 578 aaPredicted RBP14.67□□□□□ -0.06
RTN3-214ENST00000545432 ACOX1Q15067 660 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 CNGA3Q16281 694 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 APLFQ8IW19 511 aaPredicted RBP14.67□□□□□ -0.06
RTN3-214ENST00000545432 NUS1Q96E22 293 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 SIDT1Q9NXL6 827 aaKnown RBP14.67□□□□□ -0.06
RTN3-214ENST00000545432 PPIL1Q9Y3C6 166 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 PLEKHM1Q9Y4G2 1056 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 RPS6KL1Q9Y6S9 549 aa14.67□□□□□ -0.06
RTN3-214ENST00000545432 ESPL1Q14674 2120 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 GOLGA6L3A6NEY3 463 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 WIPF3A6NGB9 483 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 F8VZ95 297 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 VPS4BO75351 444 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 AGFG2O95081 481 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 SOD1P00441 154 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 PDGFAP04085 211 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 FURINP09958 794 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 ANKRD34CP0C6C1 535 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 RNF224P0DH78 156 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 UNGP13051 313 aaPredicted RBP14.66□□□□□ -0.06
RTN3-214ENST00000545432 GNLYP22749 145 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 ACTR1BP42025 376 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 POLD2P49005 469 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 PAPOLAP51003 745 aaKnown RBP14.66□□□□□ -0.06
RTN3-214ENST00000545432 ACTR1AP61163 376 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 AP1S1P61966 158 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 CDR2Q01850 454 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 PYCR3Q53H96 274 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 C16orf46Q6P387 395 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 ASB18Q6ZVZ8 466 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 TECPR1Q7Z6L1 1165 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 OR10G6Q8NH81 332 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 SLC37A2Q8TED4 501 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 PSKH2Q96QS6 385 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 CTRCQ99895 268 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 SLC39A8Q9C0K1 460 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 MLXIPLQ9NP71 852 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 SARS2Q9NP81 518 aaKnown RBP14.66□□□□□ -0.06
RTN3-214ENST00000545432 VPS4AQ9UN37 437 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 MAP4K5Q9Y4K4 846 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 PCDHGA6Q9Y5G7 932 aa14.66□□□□□ -0.06
RTN3-214ENST00000545432 MRPS18BQ9Y676 258 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms