RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 STX16-NPEPL1H3BU86 382 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 INSIG1O15503 277 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 CFLARO15519 480 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 CLDN11O75508 207 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 STC2O76061 302 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 TUFMP49411 452 aaKnown RBP16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 PKNOX1P55347 436 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 OXCT1P55809 520 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 HERVK_113P63132 956 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 ART3Q13508 389 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 OR4D1Q15615 310 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 LRRC36Q1X8D7 754 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 CLEC6AQ6EIG7 209 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 SDCCAG8Q86SQ7 713 aaPredicted RBP16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 PDSS2Q86YH6 399 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 PDZD8Q8NEN9 1154 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 MDGA1Q8NFP4 955 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 OVCA2Q8WZ82 227 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 CAPNS2Q96L46 248 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 VN1R3Q9BXE9 311 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 ERVK-6Q9BXR3 956 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 VCXQ9H320 206 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 POPDC3Q9HBV1 291 aa16.08■□□□□ 0.16
SCNN1A-221ENST00000543768 ILVBLA1L0T0 632 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 H3BMM5 538 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 CASQ2O14958 399 aaPredicted RBP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 SEC24AO95486 1093 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 MTHFD2P13995 350 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 MSX2P35548 267 aaPredicted RBP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 MS4A2Q01362 244 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 CYTH1Q15438 398 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 SETMARQ53H47 684 aaPredicted RBP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 SFT2D3Q587I9 215 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 RYBPQ8N488 228 aaPredicted RBP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 USP13Q92995 863 aaPredicted RBP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 SCLYQ96I15 445 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 ZDHHC7Q9NXF8 308 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 MED16Q9Y2X0 877 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 UBDO15205 165 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 CRTAMO95727 393 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 F11P03951 625 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 PEX2P28328 305 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 PMLP29590 882 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 CORO1AP31146 461 aaKnown RBP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 PTK2BQ14289 1009 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 GSTA3Q16772 222 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 USP41Q3LFD5 358 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 UGT3A2Q3SY77 523 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 LARP4Q71RC2 724 aaKnown RBP eCLIP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 LRRC43Q8N309 656 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 DRAXINQ8NBI3 349 aaPredicted RBP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 OR4K2Q8NGD2 314 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 GDPD5Q8WTR4 605 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 WBP2Q969T9 261 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 PLD4Q96BZ4 506 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 SMIM14Q96QK8 99 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 ATOH8Q96SQ7 321 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 RNF38Q9H0F5 515 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 INTS10Q9NVR2 710 aaKnown RBP16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 DLGAP2Q9P1A6 1054 aa16.07■□□□□ 0.16
SCNN1A-221ENST00000543768 PSMA3P25788 255 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 CDH13P55290 713 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 SH3BP2P78314 561 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 SQLEQ14534 574 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 RNF168Q8IYW5 571 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 RNF148Q8N7C7 305 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 RHEBL1Q8TAI7 183 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 EXT2Q93063 718 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 RMDN1Q96DB5 314 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 NR1H4Q96RI1 486 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 TDRD1Q9BXT4 1180 aaKnown RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 KLHL4Q9C0H6 718 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 TRPC7Q9HCX4 862 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 UTP6Q9NYH9 597 aaKnown RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 PSMD13Q9UNM6 376 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 ARIH1Q9Y4X5 557 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 BACE2Q9Y5Z0 518 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 ANAPC1Q9H1A4 1944 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 MAGEA13PA6NCF6 341 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 UBXN8O00124 270 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 PPP6CO00743 305 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 SIX3O95343 332 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 RHOCP08134 193 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 ME2P23368 584 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 PDAP1Q13442 181 aaKnown RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 FLOT2Q14254 428 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 TAF1AQ15573 450 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 GLT6D1Q7Z4J2 308 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 PTGR2Q8N8N7 351 aaPredicted RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 SLAIN1Q8ND83 568 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 LPGAT1Q92604 370 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 PPP2R3CQ969Q6 453 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 ITFG2Q969R8 447 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 TMA16Q96EY4 203 aaKnown RBP16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 C3orf30Q96M34 536 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 CLSTN3Q9BQT9 956 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 TRIM4Q9C037 500 aa16.06■□□□□ 0.16
SCNN1A-221ENST00000543768 EBF3Q9H4W6 596 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms