RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SPO11Q9Y5K1 396 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 MRFAP1Q9Y605 127 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 HS3ST3A1Q9Y663 406 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 SPAG17Q6Q759 2223 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 TRPM6Q9BX84 2022 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 NUMA1Q14980 2115 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 ADAMTS9Q9P2N4 1935 aa6.31□□□□□ -1.4
LTBR-212ENST00000543542 CUL9Q8IWT3 2517 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 TP53BP1Q12888 1972 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 RGSL1A5PLK6 1076 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 POM121BA6NF01 834 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 FAM187AA6NFU0 413 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 H0Y8X5 98 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 TLR4O00206 839 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 DNALI1O14645 258 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 AURKAO14965 403 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 RAD51BO15315 384 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 INPP4BO15327 924 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 FOXD2O60548 495 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 LRP3O75074 770 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 ASMTLO95671 621 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 CER1O95813 267 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 PYGLP06737 847 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 ZNF806P0C7X5 589 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 TSHRP16473 764 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 LPOP22079 712 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 HTR1BP28222 390 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 ADRA1AP35348 466 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 IGFALSP35858 605 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SPAM1P38567 509 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 PTGIRP43119 386 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 RABIFP47224 123 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 NPY2RP49146 381 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SPINT3P49223 89 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 MRPS25P82663 173 aaKnown RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 CDK16Q00536 496 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 CALCOCO2Q13137 446 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 MTM1Q13496 603 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 PDE1CQ14123 709 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 FGL2Q14314 439 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 INPP5AQ14642 412 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SF3A2Q15428 464 aaKnown RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 TAF1AQ15573 450 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 CSRP2Q16527 193 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 WSCD2Q2TBF2 565 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 CCDC38Q502W7 563 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 CERCAMQ5T4B2 595 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 ZDHHC20Q5W0Z9 365 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 KCTD11Q693B1 232 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 TCEAL6Q6IPX3 200 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 PNCKQ6P2M8 343 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SLC23A3Q6PIS1 610 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 IL27RAQ6UWB1 636 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 ENPP7Q6UWV6 458 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 KYAT3Q6YP21 454 aaKnown RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 GCNT7Q6ZNI0 430 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 TMC3Q7Z5M5 1100 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 DCP2Q8IU60 420 aaKnown RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 OTUD6BQ8N6M0 293 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 GPR161Q8N6U8 529 aaKnown RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 MFSD2AQ8NA29 543 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 TP53I13Q8NBR0 393 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 PLA2G15Q8NCC3 412 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 BBOF1Q8ND07 529 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 OR13H1Q8NG92 308 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 OR4K2Q8NGD2 314 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 BRSK1Q8TDC3 778 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SLCO2A1Q92959 643 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SCAMP4Q969E2 229 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 TCEAL3Q969E4 200 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SNF8Q96H20 258 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 LYSMD1Q96S90 227 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 APOOQ9BUR5 198 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 RIOK2Q9BVS4 552 aaKnown RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 RAB17Q9H0T7 212 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 ABCG8Q9H221 673 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 DPH5Q9H2P9 285 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 WDR26Q9H7D7 661 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SUDS3Q9H7L9 328 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 GDF3Q9NR23 364 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 EIF2B3Q9NR50 452 aaKnown RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 MBNL1Q9NR56 388 aaKnown RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 PHPT1Q9NRX4 125 aaPredicted RBP6.3□□□□□ -1.4
LTBR-212ENST00000543542 ANAPC5Q9UJX4 755 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 ANKRD6Q9Y2G4 727 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 OR1A2Q9Y585 309 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 ARL5AQ9Y689 179 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 SLC30A1Q9Y6M5 507 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 MYLKQ15746 1914 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 DOCK9Q9BZ29 2069 aa6.3□□□□□ -1.4
LTBR-212ENST00000543542 VPS13AQ96RL7 3174 aa6.29□□□□□ -1.4
LTBR-212ENST00000543542 GLYATL1P3A0A0U1RQE8 302 aa6.29□□□□□ -1.4
LTBR-212ENST00000543542 TCRBV7S3A2A0A539 114 aa6.29□□□□□ -1.4
LTBR-212ENST00000543542 HEATR9A2RTY3 570 aa6.29□□□□□ -1.4
LTBR-212ENST00000543542 H3BM21 787 aa6.29□□□□□ -1.4
LTBR-212ENST00000543542 ARHGAP33O14559 1287 aa6.29□□□□□ -1.4
LTBR-212ENST00000543542 TOR1BO14657 336 aa6.29□□□□□ -1.4
LTBR-212ENST00000543542 VILLO15195 856 aa6.29□□□□□ -1.4
LTBR-212ENST00000543542 RAD51CO43502 376 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms