RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 CATSPERZQ9NTU4 200 aa13.48□□□□□ -0.25
PPME1-208ENST00000543525 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
PPME1-208ENST00000543525 NDUFAF1Q9Y375 327 aa13.48□□□□□ -0.25
PPME1-208ENST00000543525 SLC12A8A0AV02 714 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 CCDC162PA2VCL2 907 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 PRORSD1PA6NEY8 169 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 SYN3O14994 580 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 PRAMEF11O60813 436 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 ADAMTS4O75173 837 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 PGM3O95394 542 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 ARSAP15289 507 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 TSPAN8P19075 237 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 HDCP19113 662 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 GPX3P22352 226 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 CDKL1Q00532 357 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 RALGDSQ12967 914 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 ADRM1Q16186 407 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 KIF19Q2TAC6 998 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 UGT3A2Q3SY77 523 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 C8orf82Q6P1X6 216 aaPredicted RBP13.47□□□□□ -0.25
PPME1-208ENST00000543525 ZNF549Q6P9A3 640 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 MIB1Q86YT6 1006 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 COLGALT2Q8IYK4 626 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 BBS5Q8N3I7 341 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 PNPLA1Q8N8W4 532 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 OR52K2Q8NGK3 314 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 RHEBL1Q8TAI7 183 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 ZNF599Q96NL3 588 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 AKTIPQ9H8T0 292 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 PADI4Q9UM07 663 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 ARL5AQ9Y689 179 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 FAM92AA1XBS5 289 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 AZIN1O14977 448 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 B4GALT3O60512 393 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 HMBSP08397 361 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 ZNF26P17031 533 aaPredicted RBP13.47□□□□□ -0.25
PPME1-208ENST00000543525 PSMC3P17980 439 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 OR1E1P30953 314 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 MYBPC1Q00872 1141 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 TRIM71Q2Q1W2 868 aaKnown RBP13.47□□□□□ -0.25
PPME1-208ENST00000543525 CTXN3Q4LDR2 81 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
PPME1-208ENST00000543525 LAYNQ6UX15 382 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 DHFR2Q86XF0 187 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 HERC6Q8IVU3 1022 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 OR4L1Q8NH43 312 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 LRTOMTQ8WZ04 291 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 TRIB2Q92519 343 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 FAM193BQ96PV7 902 aaPredicted RBP13.47□□□□□ -0.25
PPME1-208ENST00000543525 UHRF1Q96T88 793 aaPredicted RBP13.47□□□□□ -0.25
PPME1-208ENST00000543525 HOPXQ9BPY8 73 aaPredicted RBP13.47□□□□□ -0.25
PPME1-208ENST00000543525 AARSD1Q9BTE6 412 aaKnown RBP13.47□□□□□ -0.25
PPME1-208ENST00000543525 SLC2A11Q9BYW1 496 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 TRIM15Q9C019 465 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
PPME1-208ENST00000543525 SYTL2Q9HCH5 934 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 MID1IP1Q9NPA3 183 aa13.47□□□□□ -0.25
PPME1-208ENST00000543525 ATP6AP2A0A1C7CYW4 349 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 VPS4BO75351 444 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 ATP6AP2O75787 350 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 CDK14O94921 469 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 NDST3O95803 873 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 TBX18O95935 607 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 MT-CO1P00395 513 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 IGLV3-27P01718 113 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 ZNF37AP17032 561 aaPredicted RBP13.46□□□□□ -0.25
PPME1-208ENST00000543525 CTGFP29279 349 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 ACVRL1P37023 503 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 KPNA1P52294 538 aaPredicted RBP13.46□□□□□ -0.25
PPME1-208ENST00000543525 SLC7A2P52569 658 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 INHBEP58166 350 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 SH3BP2P78314 561 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 TIAL1Q01085 375 aaKnown RBP eCLIP13.46□□□□□ -0.25
PPME1-208ENST00000543525 RING1Q06587 406 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 LSAMPQ13449 338 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 MAP7Q14244 749 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 GEN1Q17RS7 908 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 USP41Q3LFD5 358 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 KANK2Q63ZY3 851 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 CYHR1Q6ZMK1 362 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 SLC24A5Q71RS6 500 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 CIR1Q86X95 450 aaPredicted RBP13.46□□□□□ -0.25
PPME1-208ENST00000543525 MIER2Q8N344 545 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 OR9I1Q8NGQ6 314 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 TWIST2Q8WVJ9 160 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 ZUFSPQ96AP4 578 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 ZNF597Q96LX8 424 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 C3orf30Q96M34 536 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 OSBPL11Q9BXB4 747 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 COQ10BQ9H8M1 238 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 FBRSL1Q9HCM7 1045 aaKnown RBP13.46□□□□□ -0.25
PPME1-208ENST00000543525 INTS10Q9NVR2 710 aaKnown RBP13.46□□□□□ -0.25
PPME1-208ENST00000543525 POLR3BQ9NW08 1133 aaPredicted RBP13.46□□□□□ -0.25
PPME1-208ENST00000543525 COMMD8Q9NX08 183 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 APPL1Q9UKG1 709 aa13.46□□□□□ -0.25
PPME1-208ENST00000543525 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.25
PPME1-208ENST00000543525 DOCK4Q8N1I0 1966 aa13.46□□□□□ -0.26
PPME1-208ENST00000543525 A0A0J9YYE9 177 aa13.45□□□□□ -0.26
PPME1-208ENST00000543525 OR6C75A6NL08 312 aa13.45□□□□□ -0.26
PPME1-208ENST00000543525 UBXN8O00124 270 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms