RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 MCOLN3Q8TDD5 553 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 HOXA2O43364 376 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 PPP2R1BP30154 601 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 POLD2P49005 469 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 MSS51Q4VC12 460 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 POP5Q969H6 163 aaKnown RBP19.36■□□□□ 0.69
SUDS3-204ENST00000543473 ROPN1LQ96C74 230 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 ERLEC1Q96DZ1 483 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 PCDH12Q9NPG4 1184 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 ERGIC3Q9Y282 383 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 ANGPTL1O95841 491 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 CAMK2GQ13555 558 aaPredicted RBP19.36■□□□□ 0.69
SUDS3-204ENST00000543473 SPATA19Q7Z5L4 167 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 SKA1Q96BD8 255 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 VPS35Q96QK1 796 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 RBM4BQ9BQ04 359 aaKnown RBP19.36■□□□□ 0.69
SUDS3-204ENST00000543473 RBM4Q9BWF3 364 aaKnown RBP19.36■□□□□ 0.69
SUDS3-204ENST00000543473 HMX1Q9NP08 348 aaPredicted RBP19.36■□□□□ 0.69
SUDS3-204ENST00000543473 PIRTP0C851 137 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 TPTEP56180 551 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 BOP1Q14137 746 aaKnown RBP19.36■□□□□ 0.69
SUDS3-204ENST00000543473 CRY1Q16526 586 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 ZFP69Q49AA0 526 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 ZBED5Q49AG3 693 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 PAOXQ6QHF9 649 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 OR52E6Q96RD3 313 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 MRPL45Q9BRJ2 306 aaKnown RBP19.36■□□□□ 0.69
SUDS3-204ENST00000543473 TLR8Q9NR97 1041 aaKnown RBP19.36■□□□□ 0.69
SUDS3-204ENST00000543473 ATP6V1HQ9UI12 483 aa19.36■□□□□ 0.69
SUDS3-204ENST00000543473 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 C2CD4BA6NLJ0 364 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 METTL18O95568 372 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 KPNA1P52294 538 aaPredicted RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 MERTKQ12866 999 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 LRRC49Q8IUZ0 686 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 ZNF567Q8N184 647 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 TWIST2Q8WVJ9 160 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 STARD8Q92502 1023 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 GLOD4Q9HC38 313 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 CLN6Q9NWW5 311 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 FARP2O94887 1054 aaPredicted RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 FTH1P02794 183 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 EPB42P16452 691 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 UGT1A6P19224 532 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 UGT1A1P22309 533 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 UGT1A4P22310 534 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 DGKAP23743 735 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 UGT1A3P35503 534 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 UGT1A5P35504 534 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 GAD2Q05329 585 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 MED22Q15528 200 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 ABHD15Q6UXT9 468 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 RELL1Q8IUW5 271 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 SEMA3CQ99985 751 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 RASSF1Q9NS23 344 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 COL20A1Q9P218 1284 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 ZNF221Q9UK13 617 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 PDE10AQ9Y233 779 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 ARIH1Q9Y4X5 557 aaPredicted RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 TRPV2Q9Y5S1 764 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 DHX15O43143 795 aaKnown RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 RGS10O43665 173 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 OTCP00480 354 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 MPP1Q00013 466 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 ECT2LQ008S8 904 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 POU5F1Q01860 360 aaKnown RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 GPR180Q86V85 440 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 P2RY8Q86VZ1 359 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 TMEM86AQ8N2M4 240 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 NACC2Q96BF6 587 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 MED8Q96G25 268 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 SAGE2PA6NJ88 616 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 ZSWIM7Q19AV6 140 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 PPM1LQ5SGD2 360 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 INTS11Q5TA45 600 aaKnown RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 HECTD2Q5U5R9 776 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 SLC9A4Q6AI14 798 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 TMEM214Q6NUQ4 689 aaKnown RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 ZCCHC8Q6NZY4 707 aaKnown RBP19.35■□□□□ 0.69
SUDS3-204ENST00000543473 NIPA2Q8N8Q9 360 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 GAD1Q99259 594 aa19.35■□□□□ 0.69
SUDS3-204ENST00000543473 BCKDKO14874 412 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 AREL1O15033 823 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 HOXD13P35453 343 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 POLR2JP52435 117 aaKnown RBP19.34■□□□□ 0.69
SUDS3-204ENST00000543473 ADAM17P78536 824 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 EIF3MQ7L2H7 374 aaKnown RBP19.34■□□□□ 0.69
SUDS3-204ENST00000543473 GALNT5Q7Z7M9 940 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 CD101Q93033 1021 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 ASB9Q96DX5 294 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 OR52B2Q96RD2 323 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 AGAP2Q99490 1192 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 ARHGEF4Q9NR80 690 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 UGT2B11O75310 529 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 CRATP43155 626 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 NRG1Q02297 640 aaPredicted RBP19.34■□□□□ 0.69
SUDS3-204ENST00000543473 BNIP3Q12983 259 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 TRIM32Q13049 653 aa19.34■□□□□ 0.69
SUDS3-204ENST00000543473 OGFOD2Q6N063 350 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms