RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 MRNIPQ6NTE8 343 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 PGAM4Q8N0Y7 254 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 PCDH20Q8N6Y1 951 aaKnown RBP13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 GDPD5Q8WTR4 605 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 L3HYPDHQ96EM0 354 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 SLC45A3Q96JT2 553 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 ZNF599Q96NL3 588 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 SLC30A3Q99726 388 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 CLSTN3Q9BQT9 956 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 DLGAP2Q9P1A6 1054 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 AGO1Q9UL18 857 aaKnown RBP13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 CORO1CQ9ULV4 474 aaPredicted RBP13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 PRPF19Q9UMS4 504 aaKnown RBP13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 TRAF6Q9Y4K3 522 aa13.67□□□□□ -0.22
SLC3A2-220ENST00000542922 FBP2O00757 339 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 KIF3CO14782 793 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 INSIG1O15503 277 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 EFEMP2O95967 443 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 CD160O95971 181 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 PMLP29590 882 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 SUOXP51687 545 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 AQP4P55087 323 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 SH3BP2P78314 561 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 MRPS22P82650 360 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 SMARCB1Q12824 385 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 ART3Q13508 389 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 ZRSR2Q15696 482 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 PFKFB4Q16877 469 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 TYSND1Q2T9J0 566 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 CAPRIN2Q6IMN6 1127 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 CXorf57Q6NSI4 855 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 GLT6D1Q7Z4J2 308 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 SLC22A9Q8IVM8 553 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 LRRC43Q8N309 656 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 PHC3Q8NDX5 983 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 C2orf15Q8WU43 125 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 KCNA7Q96RP8 456 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 DDX50Q9BQ39 737 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 TDRD1Q9BXT4 1180 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 EML4Q9HC35 981 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 BPIFA1Q9NP55 256 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 NLE1Q9NVX2 485 aaPredicted RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 CCDC167Q9P0B6 97 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 COL4A6Q14031 1691 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 F11P03951 625 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 HERVK_113P63132 956 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 MRPS35P82673 323 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 ARF5P84085 180 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 SATB1Q01826 763 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 PDAP1Q13442 181 aaKnown RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 TRIP10Q15642 601 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 AGKQ53H12 422 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 PAQR3Q6TCH7 311 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 SETD3Q86TU7 594 aaPredicted RBP13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 PDSS2Q86YH6 399 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 PIANPQ8IYJ0 282 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 EFHBQ8N7U6 833 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 NAT14Q8WUY8 206 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 LPGAT1Q92604 370 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 GATA6Q92908 595 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 SPDL1Q96EA4 605 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 ATOH8Q96SQ7 321 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 ERVK-6Q9BXR3 956 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 UNC93B1Q9H1C4 597 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 SCUBE2Q9NQ36 999 aa13.66□□□□□ -0.22
SLC3A2-220ENST00000542922 UBDO15205 165 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 OR1I1O60431 355 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 RHOBTB1O94844 696 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 CDK14O94921 469 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 ALDOCP09972 364 aaKnown RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 OGNP20774 298 aaKnown RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 ADSLP30566 484 aaPredicted RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 INHBCP55103 352 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 FLOT2Q14254 428 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 FASTKQ14296 549 aaKnown RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 UGT3A2Q3SY77 523 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 PSAPL1Q6NUJ1 521 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 SDCCAG8Q86SQ7 713 aaPredicted RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 TTC16Q8NEE8 873 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 BHLHE22Q8NFJ8 381 aaPredicted RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 BHMTQ93088 406 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 KLHL32Q96NJ5 620 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 SLC22A12Q96S37 553 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 CWH43Q9H720 699 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 EFCAB1Q9HAE3 211 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 FKBPLQ9UIM3 349 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 C9JVG2 144 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 CDC7O00311 574 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 RNASEH1O60930 286 aaKnown RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 CLDN11O75508 207 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 HSPA1AP0DMV8 641 aaKnown RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 HSPA1BP0DMV9 641 aaKnown RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 MZF1P28698 734 aaPredicted RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 SLC26A3P40879 764 aa13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.22
SLC3A2-220ENST00000542922 NME5P56597 212 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms