RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RNF148Q8N7C7 305 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC43A3Q8NBI5 491 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 OR13J1Q8NGT2 312 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 SCAMP5Q8TAC9 235 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 RIN3Q8TB24 985 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 DDI1Q8WTU0 396 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 ANKRD49Q8WVL7 239 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 LPPQ93052 612 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 SGF29Q96ES7 293 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 DTNBP1Q96EV8 351 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 TMA16Q96EY4 203 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 TSPAN17Q96FV3 270 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC39A13Q96H72 371 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 TMEM209Q96SK2 561 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 GPATCH1Q9BRR8 931 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 FSD1LQ9BXM9 530 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 CFHR5Q9BXR6 569 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 SIK2Q9H0K1 926 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 AP5M1Q9H0R1 490 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 MFSD1Q9H3U5 465 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 PRDM5Q9NQX1 630 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 VPS45Q9NRW7 570 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 RNF186Q9NXI6 227 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 GTSE1Q9NYZ3 720 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 EPS15L1Q9UBC2 864 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 IPO11Q9UI26 975 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 AP4S1Q9Y587 144 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 HS3ST4Q9Y661 456 aa5.21□□□□□ -1.58
ATPAF1-212ENST00000542495 PLXNA3P51805 1871 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 LOC285095A0A1B0GVY8 99 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 C7orf72A4D263 438 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 KLHL33A6NCF5 533 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 INPPL1O15357 1258 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 MSI1O43347 362 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 NRP2O60462 931 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 KPNA6O60684 536 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 TRPA1O75762 1119 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 PGM3O95394 542 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 GNRH1P01148 92 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 FGF4P08620 206 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 FAM58BPP0C7Q3 252 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 CCDC166P0CW27 439 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ETS2P15036 469 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ARSAP15289 507 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 RHOQP17081 205 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 TYMPP19971 482 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 GPX3P22352 226 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 BRCC3P46736 316 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 KCNC1P48547 511 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 RENBPP51606 427 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 SUOXP51687 545 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 NDST2P52849 883 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC5A3P53794 718 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 CDKN2DP55273 166 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 TIAL1Q01085 375 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 SEPT6Q14141 434 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 IKBKEQ14164 716 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 FASTKQ14296 549 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 FSCN1Q16658 493 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 PPP1R3AQ16821 1122 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 MYLK3Q32MK0 819 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 NADK2Q4G0N4 442 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 PABPC1LQ4VXU2 614 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 AGKQ53H12 422 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 UNC50Q53HI1 259 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 NOMO2Q5JPE7 1267 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ZNF678Q5SXM1 525 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 C6orf52Q5T4I8 152 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 PIK3R6Q5UE93 754 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 RBM44Q6ZP01 1051 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ISCA2Q86U28 154 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 FUNDC1Q8IVP5 155 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 PCDH20Q8N6Y1 951 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ANKFN1Q8N957 763 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 GOLM1Q8NBJ4 401 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 FAM156AQ8NDB6 213 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 GPR150Q8NGU9 434 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 GABPB2Q8TAK5 448 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 RSPH1Q8WYR4 309 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 LPGAT1Q92604 370 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 PEX13Q92968 403 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ATP6V1E2Q96A05 226 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ROPN1LQ96C74 230 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 SUSD3Q96L08 255 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 CNBD2Q96M20 576 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 UROC1Q96N76 676 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 CDK15Q96Q40 435 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 CYP2S1Q96SQ9 504 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 NDNQ99608 321 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 SLC25A23Q9BV35 468 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 UNKQ9C0B0 810 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 PCDHAC1Q9H158 963 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 COQ10BQ9H8M1 238 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 NMUR1Q9HB89 426 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 CYP4F12Q9HCS2 524 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 TRPC7Q9HCX4 862 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 SPAG4Q9NPE6 437 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 ARMC1Q9NVT9 282 aa5.2□□□□□ -1.58
ATPAF1-212ENST00000542495 POLR3BQ9NW08 1133 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms