RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 CFAP52Q8N1V2 620 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 TRIML2Q8N7C3 387 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 GALNT11Q8NCW6 608 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 ZNF540Q8NDQ6 660 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 FBXO30Q8TB52 745 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 ZNF507Q8TCN5 953 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 PARD3BQ8TEW8 1205 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 BTN2A2Q8WVV5 523 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CDKL2Q92772 493 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 NKD1Q969G9 470 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 AZIN2Q96A70 460 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 SEC16BQ96JE7 1060 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 DNAJC7Q99615 494 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 UQCC2Q9BRT2 126 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 B3GNT4Q9C0J1 378 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 TNKS2Q9H2K2 1166 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 TMEM165Q9HC07 324 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 SPATS2LQ9NUQ6 558 aaKnown RBP7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 VPS4AQ9UN37 437 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 PRELID1Q9Y255 219 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 TP53TG5Q9Y2B4 290 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 CSMD2Q7Z408 3487 aa7.79□□□□□ -1.16
NPIPB4-215ENST00000542133 A0A087X0B3 334 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 SERTM1A2A2V5 107 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 YY2O15391 372 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 EXOC3O60645 756 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 USP1O94782 785 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 PCDH8O95206 1070 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 TGDSO95455 350 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 DDAH2O95865 285 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 ANXA6P08133 673 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 CELA2BP08218 269 aaPredicted RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 HSD3B1P14060 373 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 ZNF18P17022 549 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 NR1D1P20393 614 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 ARSDP51689 593 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 MNAT1P51948 309 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 SNRPFP62306 86 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 DLG4P78352 724 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 MPP1Q00013 466 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 SULT2A1Q06520 285 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 ADIGQ0VDE8 80 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 KIF5AQ12840 1032 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 TUBA3CQ13748 450 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 CCNG2Q16589 344 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 CCDC14Q49A88 953 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 TMPRSS9Q7Z410 1059 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 SLC9B2Q86UD5 537 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 SLITRK4Q8IW52 837 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 NELFCDQ8IXH7 590 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 PHACTR4Q8IZ21 702 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 ESX1Q8N693 406 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 GPBAR1Q8TDU6 330 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 ANKRD7Q92527 254 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 PMEPA1Q969W9 287 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 THOC1Q96FV9 657 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 CNDP1Q96KN2 507 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 CMKLR1Q99788 373 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 DDX50Q9BQ39 737 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 USB1Q9BQ65 265 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 NIF3L1Q9GZT8 377 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 CLPBQ9H078 707 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 NSRP1Q9H0G5 558 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 LRRN3Q9H3W5 708 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 CYP3A43Q9HB55 503 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 APOBEC3GQ9HC16 384 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 LUC7LQ9NQ29 371 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 ABCC13Q9NSE7 274 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 ZNF624Q9P2J8 865 aaPredicted RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 IPO11Q9UI26 975 aaKnown RBP7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 SH3BGRL2Q9UJC5 107 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 PHTF1Q9UMS5 762 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 NAALADL1Q9UQQ1 740 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 CARD8Q9Y2G2 431 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 TRPM6Q9BX84 2022 aa7.78□□□□□ -1.16
NPIPB4-215ENST00000542133 RNF103O00237 685 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 KPNA3O00505 521 aaPredicted RBP7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 NKX2-8O15522 239 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 DUX1O43812 170 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 CEP104O60308 925 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 KATNA1O75449 491 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 PALMO75781 387 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 CNTN5O94779 1100 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 HLA-DRAP01903 254 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 MT-ND3P03897 115 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 PGRP06401 933 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 PDGFRAP16234 1089 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 TSHRP16473 764 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 GJB2P29033 226 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 TXLNAP40222 546 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 STAT6P42226 847 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 ETV1P50549 477 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 ARPC4P59998 168 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 PFN3P60673 137 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 BASP1P80723 227 aaKnown RBP7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 CDC20Q12834 499 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 SLC12A1Q13621 1099 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 C16orf72Q14CZ0 275 aa7.77□□□□□ -1.17
NPIPB4-215ENST00000542133 DLG2Q15700 870 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms