RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 UROC1Q96N76 676 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TMEM79Q9BSE2 394 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TPSD1Q9BZJ3 242 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 REEP1Q9H902 201 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PLGRKTQ9HBL7 147 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CRTAC1Q9NQ79 661 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 HAO1Q9UJM8 370 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 ADAM28Q9UKQ2 775 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 VPS4AQ9UN37 437 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 MTO1Q9Y2Z2 717 aaKnown RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 ZFP37Q9Y6Q3 630 aaPredicted RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 CNTNAP1P78357 1384 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CDC123O75794 336 aaPredicted RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 IFNA6P05013 189 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 ZCCHC18P0CG32 403 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CD53P19397 219 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 DDX6P26196 483 aaKnown RBP eCLIP6.31□□□□□ -1.4
DMD-228ENST00000541735 CDH15P55291 814 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CDKL1Q00532 357 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 SMCO1Q147U7 214 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PLEKHG6Q3KR16 790 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 SBK1Q52WX2 424 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TAPT1Q6NXT6 567 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CHRDL2Q6WN34 429 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 ZNF730Q6ZMV8 503 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 HIPK1Q86Z02 1210 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 DCBLD1Q8N8Z6 715 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 OR4K17Q8NGC6 315 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PPCDCQ96CD2 204 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 NSL1Q96IY1 281 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 ZNF285Q96NJ3 590 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PAFAH2Q99487 392 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 STRA6Q9BX79 667 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 FANCFQ9NPI8 374 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TBC1D23Q9NUY8 699 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 RHBDL2Q9NX52 303 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CPQQ9Y646 472 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 SYNMO15061 1565 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 A0A0J9YVX5 310 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 WASHC1A8K0Z3 465 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 WASH3PC4AMC7 463 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 SLC33A1O00400 549 aaPredicted RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 SLC16A5O15375 505 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PER1O15534 1290 aaPredicted RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 SIN3BO75182 1162 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PIAS1O75925 651 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CCNB1P14635 433 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 WARSP23381 471 aaKnown RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 RXRGP48443 463 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 FXR2P51116 673 aaKnown RBP eCLIP6.31□□□□□ -1.4
DMD-228ENST00000541735 PUDPQ08623 228 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 NR1I3Q14994 352 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TRIM16LQ309B1 348 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 SPIN3Q5JUX0 258 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 WASH2PQ6VEQ5 465 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 FAM183BPQ6ZVS7 135 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 SV2AQ7L0J3 742 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 GPR141Q7Z602 305 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 LRRC49Q8IUZ0 686 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 USP38Q8NB14 1042 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PLA2G15Q8NCC3 412 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 C11orf65Q8NCR3 313 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TEX47Q8TBZ9 253 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 GRHL3Q8TE85 626 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PHF10Q8WUB8 498 aaKnown RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 TRIM63Q969Q1 353 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 UBE2E3Q969T4 207 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PRICKLE1Q96MT3 831 aaPredicted RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 MCCC1Q96RQ3 725 aaPredicted RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 NKX2-4Q9H2Z4 354 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 OR51B6Q9H340 312 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PIGUQ9H490 435 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CENPMQ9NSP4 180 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 ZNF541Q9H0D2 1346 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 GLTPD2A6NH11 291 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TGFB3P10600 412 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 COL6A1P12109 1028 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CCND3P30281 292 aaPredicted RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 EIF2S3P41091 472 aaKnown RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 SLC6A3Q01959 620 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 ODF4Q2M2E3 257 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 EXOC3L2Q2M3D2 409 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 DAB2IPQ5VWQ8 1189 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 LRRC70Q7Z2Q7 622 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TC2NQ8N9U0 490 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 NIFKQ9BYG3 293 aaKnown RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 NKIRAS2Q9NYR9 191 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 L1RE1Q9UN81 338 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 CNTNAP4Q9C0A0 1308 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 SLC38A8A6NNN8 435 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 H3BUI4 141 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 GSC2O15499 205 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 STX11O75558 287 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 TM7SF2O76062 418 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 SELENOVP59797 346 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 PLGLAQ15195 96 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 NKAPLQ5M9Q1 402 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 ATXN7L2Q5T6C5 722 aaPredicted RBP6.31□□□□□ -1.4
DMD-228ENST00000541735 CATSPERGQ6ZRH7 1159 aa6.31□□□□□ -1.4
DMD-228ENST00000541735 NUP54Q7Z3B4 507 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms