RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 GLT6D1Q7Z4J2 308 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 CNTN4Q8IWV2 1026 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 MDGA1Q8NFP4 955 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 PIH1D2Q8WWB5 315 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 PEX13Q92968 403 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 CAPS2Q9BXY5 557 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 IL36AQ9UHA7 158 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 GGT7Q9UJ14 662 aa27.8■■■□□ 2.04
CCM2-218ENST00000541586 GPR37L1O60883 481 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 LEFTY1O75610 366 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 CRTAMO95727 393 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 CTSLP07711 333 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 F7P08709 466 aaPredicted RBP27.79■■■□□ 2.04
CCM2-218ENST00000541586 CHN1P15882 459 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 SERPINA4P29622 427 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 MDH1P40925 334 aaKnown RBP27.79■■■□□ 2.04
CCM2-218ENST00000541586 ARSDP51689 593 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 ACVR1Q04771 509 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 MPP2Q14168 576 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 TMEM31Q5JXX7 168 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 MICALCLQ6ZW33 695 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 PLPP6Q8IY26 295 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 TUBGCP5Q96RT8 1024 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 KLF6Q99612 283 aaPredicted RBP27.79■■■□□ 2.04
CCM2-218ENST00000541586 CD248Q9HCU0 757 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 NSMCE4AQ9NXX6 385 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 RIMKLBQ9ULI2 386 aa27.79■■■□□ 2.04
CCM2-218ENST00000541586 CCL22O00626 93 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 LAMTOR5O43504 91 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 SPAG7O75391 227 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 ABL2P42684 1182 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 GRIA4P48058 902 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 RPL26P61254 145 aaKnown RBP27.78■■■□□ 2.04
CCM2-218ENST00000541586 THOC5Q13769 683 aaKnown RBP27.78■■■□□ 2.04
CCM2-218ENST00000541586 PTPRCAPQ14761 206 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 PTPRRQ15256 657 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 TAF1AQ15573 450 aaPredicted RBP27.78■■■□□ 2.04
CCM2-218ENST00000541586 TSSK4Q6SA08 328 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 C1orf210Q8IVY1 113 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 DTWD2Q8NBA8 298 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 STYXQ8WUJ0 223 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 DNAJC1Q96KC8 554 aaKnown RBP27.78■■■□□ 2.04
CCM2-218ENST00000541586 CPEB1Q9BZB8 566 aaKnown RBP27.78■■■□□ 2.04
CCM2-218ENST00000541586 SARDHQ9UL12 918 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 RPL26L1Q9UNX3 145 aaKnown RBP27.78■■■□□ 2.04
CCM2-218ENST00000541586 PRR33A8MZF0 331 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 GOLGA8RI6L899 631 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 DLL1O00548 723 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 ITGA2BP08514 1039 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 OR13C4Q8NGS5 318 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 HDAC10Q969S8 669 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 SIPA1Q96FS4 1042 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 RBBP8Q99708 897 aa27.78■■■□□ 2.04
CCM2-218ENST00000541586 BPTFQ12830 3046 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 GABRG2P18507 467 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 NDUFV2P19404 249 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 PSMD8P48556 350 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 ZNF140P52738 457 aaPredicted RBP27.77■■■□□ 2.04
CCM2-218ENST00000541586 NEPROQ6NW34 567 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 KIAA1324Q6UXG2 1013 aaKnown RBP27.77■■■□□ 2.04
CCM2-218ENST00000541586 SH2D5Q6ZV89 423 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 DSG4Q86SJ6 1040 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 DENND6AQ8IWF6 608 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 PIP4K2CQ8TBX8 421 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 MRGPRX1Q96LB2 322 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 FAM167BQ9BTA0 163 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 MCMBPQ9BTE3 642 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 C1QTNF1Q9BXJ1 281 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 RSPH9Q9H1X1 276 aaPredicted RBP27.77■■■□□ 2.04
CCM2-218ENST00000541586 SSU72Q9NP77 194 aaKnown RBP27.77■■■□□ 2.04
CCM2-218ENST00000541586 PPM1HQ9ULR3 514 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 WASF2Q9Y6W5 498 aa27.77■■■□□ 2.04
CCM2-218ENST00000541586 CACNA1IQ9P0X4 2223 aa27.76■■■□□ 2.04
CCM2-218ENST00000541586 C2orf81A6NN90 581 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 KPNA3O00505 521 aaPredicted RBP27.76■■■□□ 2.03
CCM2-218ENST00000541586 PRPF4O43172 522 aaKnown RBP eCLIP27.76■■■□□ 2.031e-6■■□□□ 13.8
CCM2-218ENST00000541586 SLC7A4O43246 635 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 RFPL1O75677 317 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 CTPS1P17812 591 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 SPRP35270 261 aaPredicted RBP27.76■■■□□ 2.03
CCM2-218ENST00000541586 CSE1LP55060 971 aaKnown RBP27.76■■■□□ 2.03
CCM2-218ENST00000541586 PRAMEP78395 509 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 TMPRSS15P98073 1019 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 ZNF776Q68DI1 518 aaPredicted RBP27.76■■■□□ 2.03
CCM2-218ENST00000541586 TIFABQ6ZNK6 161 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 PAF1Q8N7H5 531 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 TBATAQ96M53 351 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 HACD3Q9P035 362 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 SMG5Q9UPR3 1016 aaKnown RBP27.76■■■□□ 2.03
CCM2-218ENST00000541586 CKAP5Q14008 2032 aa27.76■■■□□ 2.03
CCM2-218ENST00000541586 FAM47DPA6NHR8 397 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 TYROBPO43914 113 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 RPP40O75818 363 aaKnown RBP27.75■■■□□ 2.03
CCM2-218ENST00000541586 PRNPP04156 253 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 UGT2B4P06133 528 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 PYGBP11216 843 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 SLC1A2P43004 574 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 LIMK2P53671 638 aa27.75■■■□□ 2.03
CCM2-218ENST00000541586 RPS14P62263 151 aaKnown RBP27.75■■■□□ 2.03
CCM2-218ENST00000541586 CTBP1Q13363 440 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms