RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MMABQ96EY8 250 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 FRG2BQ96QU4 278 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ZNF347Q96SE7 839 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ERVMER34-1Q9H9K5 563 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 Q9N2J8 555 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 BPIFA1Q9NP55 256 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ASAH2Q9NR71 780 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ATP8A2Q9NTI2 1148 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 SPATS2LQ9NUQ6 558 aaKnown RBP4.35□□□□□ -1.71
SNHG1-217ENST00000541578 GRHL1Q9NZI5 618 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 OGFRQ9NZT2 677 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 NENFQ9UMX5 172 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 ICKQ9UPZ9 632 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 EP400Q96L91 3159 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 PLEKHG1Q9ULL1 1385 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 RGS12O14924 1447 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 PTCH1Q13635 1447 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 SETBP1Q9Y6X0 1596 aa4.35□□□□□ -1.71
SNHG1-217ENST00000541578 CHD4Q14839 1912 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 LOC100509620A0A075B734 347 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 LY6G6EA0A0G2JKS1 128 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 LRRC72A6NJI9 287 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 PROB1E7EW31 1015 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 RRHO14718 337 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 SCAMP1O15126 338 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 SLC25A17O43808 307 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 CNOT3O75175 753 aaKnown RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 ENTPD3O75355 529 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 PGM3O95394 542 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 SRPRAP08240 638 aaKnown RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 MYBL1P10243 752 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 GLULP15104 373 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 PTPN2P17706 415 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 ME1P48163 572 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 PIP4K2AP48426 406 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 POLGP54098 1239 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 IKQ13123 557 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 TNFAIP1Q13829 316 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 RNPS1Q15287 305 aaKnown RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 C15orf59Q2T9L4 293 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 C9orf152Q5JTZ5 239 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 CES5AQ6NT32 575 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 GLDNQ6ZMI3 551 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 IRF2BP2Q7Z5L9 587 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 TECPR1Q7Z6L1 1165 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 SLFN11Q7Z7L1 901 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 TBC1D26Q86UD7 250 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 WDR5BQ86VZ2 330 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 IQCA1Q86XH1 822 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 SCML4Q8N228 414 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 PAQR4Q8N4S7 273 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 DPP10Q8N608 796 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 IP6K1Q92551 441 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 OTULINQ96BN8 352 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 P2RY11Q96G91 374 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 TMEM68Q96MH6 324 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 GCNAQ96QF7 691 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 FCRL5Q96RD9 977 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 FOXP1Q9H334 677 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 NDST4Q9H3R1 872 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 OSGEPL1Q9H4B0 414 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 SCPEP1Q9HB40 452 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 POT1Q9NUX5 634 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 ARHGEF38Q9NXL2 777 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 MARCH4Q9P2E8 410 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 NLKQ9UBE8 527 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 PTRH2Q9Y3E5 179 aaKnown RBP4.34□□□□□ -1.71
SNHG1-217ENST00000541578 CEP162Q5TB80 1403 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 DUOX2Q9NRD8 1548 aa4.34□□□□□ -1.71
SNHG1-217ENST00000541578 EHBP1L1Q8N3D4 1523 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 LRPPRCP42704 1394 aaKnown RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 UTYO14607 1347 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 SOS1Q07889 1333 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ADGRF5Q8IZF2 1346 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 TARSL2A2RTX5 802 aaKnown RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 CXorf65A6NEN9 183 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 GLOD5A6NK44 160 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 A6NL46 340 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 C2CD4BA6NLJ0 364 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 TAF4O00268 1085 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 IPO8O15397 1037 aaKnown RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 SEC14L5O43304 696 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ADAM20O43506 726 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 MTA2O94776 668 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 NKX2-2O95096 273 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 CSPG5O95196 566 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 DDAH2O95865 285 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 TFP02787 698 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 HOXB5P09067 269 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 SCG2P13521 617 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 IL7RP16871 459 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ZNF182P17025 639 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 OAS2P29728 719 aaKnown RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 CDAP32320 146 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 CIITAP33076 1130 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 UBA7P41226 1012 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 TNNT3P45378 269 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms