RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 DDX3YO15523 660 aaKnown RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 PABPC1LQ4VXU2 614 aaKnown RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 KCTD8Q6ZWB6 473 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 SYVN1Q86TM6 617 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 TMIEQ8NEW7 156 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 IGDCC4Q8TDY8 1250 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 RIT1Q92963 219 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 TMEM68Q96MH6 324 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 PGLYRP2Q96PD5 576 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 TAAR1Q96RJ0 339 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 MCCC2Q9HCC0 563 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 DNMT3LQ9UJW3 386 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 TLX3O43711 291 aaPredicted RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 SLC35G4P0C7Q5 338 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 ERVK-24P63145 666 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 CEP295NLQ96MC4 621 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 RC3H2Q9HBD1 1191 aaKnown RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 BCKDKO14874 412 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 SLC25A3Q00325 362 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 LIPMQ5VYY2 423 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 EIF5AL1Q6IS14 154 aaKnown RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 CES5AQ6NT32 575 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 MCOLN2Q8IZK6 566 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 MRPL9Q9BYD2 267 aaKnown RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 ABI3Q9P2A4 366 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 DUSP10Q9Y6W6 482 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 CELF2O95319 508 aaKnown RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 USP17L7P0C7H9 530 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 VLDLRP98155 873 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 LAMTOR4Q0VGL1 99 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 TLR1Q15399 786 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 NEPROQ6NW34 567 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 C16orf46Q6P387 395 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 UBE2Q1Q7Z7E8 422 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 ANKRD13AQ8IZ07 590 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 METTL21AQ8WXB1 218 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 IFT80Q9P2H3 777 aaPredicted RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 ARL5AQ9Y689 179 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 FAM205CA6NFA0 338 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 H3BM21 787 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 LINC00032P0C843 101 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 PLEKHH3Q7Z736 793 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 ADAMTSL2Q86TH1 951 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 POF1BQ8WVV4 589 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 C17orf50Q8WW18 174 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 MAFIPQ8WZ33 124 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 NOL11Q9H8H0 719 aaKnown RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 EQTNQ9NQ60 294 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 ETNK2Q9NVF9 386 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 B8ZZF3 427 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 PRMT5O14744 637 aaPredicted RBP15.35■□□□□ 0.05
HMGA2-210ENST00000541363 NKRFO15226 690 aaKnown RBP eCLIP15.35■□□□□ 0.054e-8■□□□□ 8.1
HMGA2-210ENST00000541363 OR2L2Q8NH16 312 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 RDH11Q8TC12 318 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 TREM1Q9NP99 234 aa15.35■□□□□ 0.05
HMGA2-210ENST00000541363 CDC25CP30307 473 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 KCNT2Q6UVM3 1135 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 VANGL1Q8TAA9 524 aaPredicted RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 TP53INP1Q96A56 240 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ZNF180Q9UJW8 692 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 DGKBQ9Y6T7 804 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ARPC4P59998 168 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 PRKG2Q13237 762 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 TTMPQ5BVD1 217 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 GPRC5CQ9NQ84 441 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ALKBH4Q9NXW9 302 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 PRPF19Q9UMS4 504 aaKnown RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 GAKO14976 1311 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ZSCAN5CA6NGD5 496 aaPredicted RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 KAT7O95251 611 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 CBX2Q14781 532 aaPredicted RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 CPTPQ5TA50 214 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 SDR16C5Q8N3Y7 309 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 OR2AJ1Q8NGZ0 328 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ZKSCAN4Q969J2 545 aaPredicted RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ZSCAN5AQ9BUG6 496 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 BTRCQ9Y297 605 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 FADS2P1A8MWK0 482 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 GSC2O15499 205 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 SCGB1D2O95969 90 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 IFNA7P01567 189 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 SERPINA6P08185 405 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 UBAP2LQ14157 1087 aaKnown RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 RRP1BQ14684 758 aaKnown RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 GTF2IRD2BQ6EKJ0 949 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 GTF2IRD2Q86UP8 949 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 GHDCQ8N2G8 530 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ELAC1Q9H777 363 aaKnown RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 CAPN6Q9Y6Q1 641 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 CACNA1FO60840 1977 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 IGFBP5P24593 272 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 RBM20Q5T481 1227 aaKnown RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 ETNPPLQ8TBG4 499 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 BRINP2Q9C0B6 783 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 PAK6Q9NQU5 681 aaPredicted RBP15.34■□□□□ 0.05
HMGA2-210ENST00000541363 GULP1Q9UBP9 304 aa15.34■□□□□ 0.05
HMGA2-210ENST00000541363 PPM1BO75688 479 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms