RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 RAMP2O60895 175 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 TNFAIP8O95379 198 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 URODP06132 367 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 ARNTP27540 789 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 PCSK6P29122 969 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 ADSLP30566 484 aaPredicted RBP17.19■□□□□ 0.34
SPIDR-227ENST00000541342 MPP1Q00013 466 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 TWF1Q12792 350 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 C5orf22Q49AR2 442 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 KDELC2Q7Z4H8 507 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 TMA16Q96EY4 203 aaKnown RBP17.19■□□□□ 0.34
SPIDR-227ENST00000541342 Q9H521 79 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 VTI1BQ9UEU0 232 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 TLK1Q9UKI8 766 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 PCDHGA7Q9Y5G6 932 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 TTC24A2A3L6 582 aaPredicted RBP17.19■□□□□ 0.34
SPIDR-227ENST00000541342 SDHDO14521 159 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 GEMP55040 296 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 SERINC3Q13530 473 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 ACBD5Q5T8D3 534 aaPredicted RBP17.19■□□□□ 0.34
SPIDR-227ENST00000541342 IL23RQ5VWK5 629 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 TMEM150AQ86TG1 271 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 SETD3Q86TU7 594 aaPredicted RBP17.19■□□□□ 0.34
SPIDR-227ENST00000541342 DENND1CQ8IV53 801 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 PELI3Q8N2H9 469 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 OR52K2Q8NGK3 314 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 SCYL1Q96KG9 808 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 YME1L1Q96TA2 773 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 ATXN3LQ9H3M9 355 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 SP110Q9HB58 689 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 TNFRSF12AQ9NP84 129 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 TRPM5Q9NZQ8 1165 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 MID2Q9UJV3 735 aa17.19■□□□□ 0.34
SPIDR-227ENST00000541342 F5H5T6 163 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 RENBPP51606 427 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 SLC12A1Q13621 1099 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 KDELC1Q6UW63 502 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 GK5Q6ZS86 529 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 ZNF354CQ86Y25 554 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 PGBD5Q8N414 524 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 TEX26Q8N6G2 289 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 DLG3Q92796 817 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 NXNL1Q96CM4 212 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 TRMT2BQ96GJ1 504 aaKnown RBP17.18■□□□□ 0.34
SPIDR-227ENST00000541342 SLC25A51Q9H1U9 297 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 EFCAB1Q9HAE3 211 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 C7orf72A4D263 438 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 STC2O76061 302 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 MMP2P08253 660 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 HSPA1AP0DMV8 641 aaKnown RBP17.18■□□□□ 0.34
SPIDR-227ENST00000541342 HSPA1BP0DMV9 641 aaKnown RBP17.18■□□□□ 0.34
SPIDR-227ENST00000541342 HADHAP40939 763 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 POU6F1Q14863 301 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 PARP15Q460N3 678 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 MARC1Q5VT66 337 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 RANBP10Q6VN20 620 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 B3GNT6Q6ZMB0 384 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 C16orf59Q7L2K0 433 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 TXNDC5Q8NBS9 432 aaKnown RBP17.18■□□□□ 0.34
SPIDR-227ENST00000541342 ATP6V1E2Q96A05 226 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 IMP4Q96G21 291 aaKnown RBP17.18■□□□□ 0.34
SPIDR-227ENST00000541342 ZFP37Q9Y6Q3 630 aaPredicted RBP17.18■□□□□ 0.34
SPIDR-227ENST00000541342 PRRG1O14668 218 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 CHRNA4P43681 627 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 MAPKAPK2P49137 400 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 SGSHP51688 502 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 CTBP1Q13363 440 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 ART3Q13508 389 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 TBC1D25Q3MII6 688 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 PTAR1Q7Z6K3 402 aaPredicted RBP17.18■□□□□ 0.34
SPIDR-227ENST00000541342 CATSPER1Q8NEC5 780 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 FAM81AQ8TBF8 368 aa17.18■□□□□ 0.34
SPIDR-227ENST00000541342 ZFRQ96KR1 1074 aaKnown RBP17.18■□□□□ 0.34
SPIDR-227ENST00000541342 A0A0D9SEW6 157 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 H3BNC9 293 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 TEX28O15482 410 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 GJB3O75712 270 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 PENKP01210 267 aaPredicted RBP17.17■□□□□ 0.34
SPIDR-227ENST00000541342 LINC00271P0C7V0 271 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 PCSK7Q16549 785 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 DNAJB7Q7Z6W7 309 aaPredicted RBP17.17■□□□□ 0.34
SPIDR-227ENST00000541342 CNTN4Q8IWV2 1026 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 TMEM199Q8N511 208 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 RNF11Q9Y3C5 154 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 AP3B1O00203 1094 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 LILRB3O75022 631 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 CORO1AP31146 461 aaKnown RBP17.17■□□□□ 0.34
SPIDR-227ENST00000541342 ARCN1P48444 511 aaKnown RBP17.17■□□□□ 0.34
SPIDR-227ENST00000541342 PRKAA2P54646 552 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 RPS24P62847 133 aaKnown RBP17.17■□□□□ 0.34
SPIDR-227ENST00000541342 DSC2Q02487 901 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 MAP7Q14244 749 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 EML3Q32P44 896 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 CNSTQ6PJW8 725 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 AMIGO2Q86SJ2 522 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 CHERPQ8IWX8 916 aaKnown RBP17.17■□□□□ 0.34
SPIDR-227ENST00000541342 FSD1LQ9BXM9 530 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 PCDHAC1Q9H158 963 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 ENTPD7Q9NQZ7 604 aa17.17■□□□□ 0.34
SPIDR-227ENST00000541342 INSL5Q9Y5Q6 135 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms