RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 TCF4P15884 667 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 CR2P20023 1033 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 LHCGRP22888 699 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 NFKBIAP25963 317 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 HSPA9P38646 679 aaKnown RBP23.97■■□□□ 1.43
LEMD3-203ENST00000541171 POLD2P49005 469 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 TYRO3Q06418 890 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 KLHL30Q0D2K2 578 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 NFATC3Q12968 1075 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 DOK6Q6PKX4 331 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 SLC30A9Q6PML9 568 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 Q6ZVL8 140 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 BBS5Q8N3I7 341 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 NSMCE1Q8WV22 266 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 DTD2Q96FN9 168 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 FRMD8Q9BZ67 464 aaPredicted RBP23.97■■□□□ 1.43
LEMD3-203ENST00000541171 MRPL47Q9HD33 250 aaKnown RBP23.97■■□□□ 1.43
LEMD3-203ENST00000541171 PCDHB11Q9Y5F2 797 aa23.97■■□□□ 1.43
LEMD3-203ENST00000541171 ARHGEF17Q96PE2 2063 aaPredicted RBP23.96■■□□□ 1.43
LEMD3-203ENST00000541171 A0A0U1RQS6 177 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 NPIPB15A6NHN6 443 aaPredicted RBP23.96■■□□□ 1.43
LEMD3-203ENST00000541171 C9orf172C9J069 976 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 MAFKO60675 156 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 CCL4P13236 92 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 CTPS1P17812 591 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 PCK1P35558 622 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 CDK3Q00526 305 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 DPYSL2Q16555 572 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 FILIP1LQ4L180 1135 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 CCDC183Q5T5S1 534 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 PRICKLE2Q7Z3G6 844 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 POLNQ7Z5Q5 900 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 TSPAN33Q86UF1 283 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 ATPAF2Q8N5M1 289 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 PATE1Q8WXA2 126 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 NUDT22Q9BRQ3 303 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.96■■□□□ 1.43
LEMD3-203ENST00000541171 KCTD5Q9NXV2 234 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 AIPL1Q9NZN9 384 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 SCN8AQ9UQD0 1980 aa23.96■■□□□ 1.43
LEMD3-203ENST00000541171 CTBSQ01459 385 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 ANO6Q4KMQ2 910 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 BOLA3Q53S33 107 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 C17orf82Q86X59 251 aaPredicted RBP23.95■■□□□ 1.42
LEMD3-203ENST00000541171 CBARPQ8N350 705 aaPredicted RBP23.95■■□□□ 1.42
LEMD3-203ENST00000541171 RCBTB1Q8NDN9 531 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 JPH3Q8WXH2 748 aaPredicted RBP23.95■■□□□ 1.42
LEMD3-203ENST00000541171 SPOCK2Q92563 424 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 TRIM11Q96F44 468 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 CSPG4P5Q96PW8 444 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 MGME1Q9BQP7 344 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 TRNAU1APQ9NX07 287 aaKnown RBP23.95■■□□□ 1.42
LEMD3-203ENST00000541171 CD84Q9UIB8 345 aa23.95■■□□□ 1.42
LEMD3-203ENST00000541171 HEMK1Q9Y5R4 338 aaPredicted RBP23.95■■□□□ 1.42
LEMD3-203ENST00000541171 GOLGA6L22H0YM25 854 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 MYBL1P10243 752 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 RARAP10276 462 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 ADCY8P40145 1251 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 PRKCIP41743 596 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 MMP13P45452 471 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 ARMC12Q5T9G4 340 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 TMEM164Q5U3C3 297 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 MARC1Q5VT66 337 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 ZNF574Q6ZN55 896 aaPredicted RBP23.94■■□□□ 1.42
LEMD3-203ENST00000541171 RFLNAQ6ZTI6 216 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 ZSCAN1Q8NBB4 408 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 SCRN2Q96FV2 425 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 FAM117AQ9C073 453 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 NAT10Q9H0A0 1025 aaKnown RBP23.94■■□□□ 1.42
LEMD3-203ENST00000541171 PLEKHM1Q9Y4G2 1056 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 PCDHGA4Q9Y5G9 962 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 ST14Q9Y5Y6 855 aa23.94■■□□□ 1.42
LEMD3-203ENST00000541171 ZW10O43264 779 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 PGLSO95336 258 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 WT1P19544 449 aaPredicted RBP23.93■■□□□ 1.42
LEMD3-203ENST00000541171 GPR1P46091 355 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 CYP4F2P78329 520 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 ITKQ08881 620 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 NKAIN2Q5VXU1 208 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 TXNRD3NBQ6F5E7 133 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 USP45Q70EL2 814 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 ZNF438Q7Z4V0 828 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 CCDC74BQ96LY2 380 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 SMIM14Q96QK8 99 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 NT5MQ9NPB1 228 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 SLC17A4Q9Y2C5 497 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 TMEM98Q9Y2Y6 226 aa23.93■■□□□ 1.42
LEMD3-203ENST00000541171 IGHV5-10-1A0A0J9YXX1 117 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 A0A1W2PQC6 194 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 PSMD11O00231 422 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 CD1CP29017 333 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 ACTR1BP42025 376 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 ACTR1AP61163 376 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 KCNC4Q03721 635 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 DTX1Q86Y01 620 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 NAGSQ8N159 534 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 BTBD6Q96KE9 485 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 CLMPQ9H6B4 373 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 PCDH18Q9HCL0 1135 aa23.92■■□□□ 1.42
LEMD3-203ENST00000541171 SMTNL1A8MU46 457 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms