RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 H3BMM5 538 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 PDLIM1O00151 329 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 GPR182O15218 404 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 PAPSS2O95340 614 aaPredicted RBP12.43□□□□□ -0.42
NEK6-213ENST00000540326 STAMBPO95630 424 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 PRSS56P0CW18 603 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 HSPA8P11142 646 aaKnown RBP12.43□□□□□ -0.42
NEK6-213ENST00000540326 SLC2A3P11169 496 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 CAPN3P20807 821 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 SOX11P35716 441 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 THPOP40225 353 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 ACADVLP49748 655 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 CDH15P55291 814 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 TIAL1Q01085 375 aaKnown RBP eCLIP12.43□□□□□ -0.42
NEK6-213ENST00000540326 PRKCQQ04759 706 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 EFEMP1Q12805 493 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 SEMA3AQ14563 771 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 MRPL10Q7Z7H8 261 aaKnown RBP12.43□□□□□ -0.42
NEK6-213ENST00000540326 MIB1Q86YT6 1006 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 PCYOX1LQ8NBM8 494 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 OR13C4Q8NGS5 318 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 RIN3Q8TB24 985 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 ARRDC2Q8TBH0 407 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 TRPC4APQ8TEL6 797 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 TWIST2Q8WVJ9 160 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 IGSF8Q969P0 613 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 DTNBP1Q96EV8 351 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 ZYG11BQ9C0D3 744 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 LIN28AQ9H9Z2 209 aaKnown RBP12.43□□□□□ -0.42
NEK6-213ENST00000540326 ATXN10Q9UBB4 475 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 BTRCQ9Y297 605 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 MYO16Q9Y6X6 1858 aa12.43□□□□□ -0.42
NEK6-213ENST00000540326 TDRD15B5MCY1 1934 aaKnown RBP12.43□□□□□ -0.42
NEK6-213ENST00000540326 CROCCQ5TZA2 2017 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 H0YJX3 145 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 HNRNPRO43390 633 aaKnown RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 GOT2P00505 430 aaKnown RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 HMBSP08397 361 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 GNAO1P09471 354 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 ATXN1LP0C7T5 689 aaKnown RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 LINC00032P0C843 101 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 GRK4P32298 578 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 TBX4P57082 545 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 USP46P62068 366 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 TUSC3Q13454 348 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 GALNT3Q14435 633 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 PABPC1LQ4VXU2 614 aaKnown RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 LRRC23Q53EV4 343 aaPredicted RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 FAM47BQ8NA70 645 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 RPL10LQ96L21 214 aaKnown RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 C1orf74Q96LT6 269 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 UHRF1Q96T88 793 aaPredicted RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 ADAM2Q99965 735 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 DUS2Q9NX74 493 aaKnown RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 HSFX1Q9UBD0 423 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 TLR6Q9Y2C9 796 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 MYRFQ9Y2G1 1151 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 HTTP42858 3142 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 WASH4PA8MWX3 477 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 CD3EAPO15446 510 aaKnown RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 GLP2RO95838 553 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 MTHFD2P13995 350 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 GFAPP14136 432 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 FDXRP22570 491 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 NDST2P52849 883 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 ECT2LQ008S8 904 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 PLOD1Q02809 727 aaPredicted RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 NHSL2Q5HYW2 709 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 TBCELQ5QJ74 424 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 RAP1GAP2Q684P5 730 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 HACD2Q6Y1H2 254 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 ZNF683Q8IZ20 524 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 ZNF513Q8N8E2 541 aaPredicted RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 ROPN1LQ96C74 230 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 TUBGCP3Q96CW5 907 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 RMND5BQ96G75 393 aaPredicted RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 SEMA3CQ99985 751 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 TUBB1Q9H4B7 451 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 PRDM5Q9NQX1 630 aaPredicted RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.424e-6■■■□□ 16.9
NEK6-213ENST00000540326 HEMK1Q9Y5R4 338 aaPredicted RBP12.42□□□□□ -0.42
NEK6-213ENST00000540326 DOCK4Q8N1I0 1966 aa12.42□□□□□ -0.42
NEK6-213ENST00000540326 TRPM7Q96QT4 1865 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 CCDC162PA2VCL2 907 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 H3BNH8 94 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 AZIN1O14977 448 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 ANGPT2O15123 496 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 TMCC1O94876 653 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 HGFP14210 728 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 ZNF23P17027 643 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 ZNF37AP17032 561 aaPredicted RBP12.41□□□□□ -0.42
NEK6-213ENST00000540326 RHOQP17081 205 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 FBXL22Q6P050 247 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 SLC15A3Q8IY34 581 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 MIER2Q8N344 545 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 CBR4Q8N4T8 237 aa12.41□□□□□ -0.42
NEK6-213ENST00000540326 DUS3LQ96G46 650 aaKnown RBP12.41□□□□□ -0.42
NEK6-213ENST00000540326 SLC39A13Q96H72 371 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms