RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CTXN3Q4LDR2 81 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 C16orf59Q7L2K0 433 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 TWIST2Q8WVJ9 160 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 ASB9Q96DX5 294 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 NSMCE3Q96MG7 304 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 TMEM74Q96NL1 305 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 SLC30A3Q99726 388 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 Q9H521 79 aa13.65□□□□□ -0.22
BNIP3-202ENST00000540159 NUP214P35658 2090 aaPredicted RBP13.65□□□□□ -0.22
BNIP3-202ENST00000540159 TDRD15B5MCY1 1934 aaKnown RBP13.65□□□□□ -0.22
BNIP3-202ENST00000540159 SOCS2O14508 198 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 DUSP11O75319 330 aaKnown RBP13.65□□□□□ -0.23
BNIP3-202ENST00000540159 RHOBTB1O94844 696 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 RBP1P09455 135 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 ITGB6P18564 788 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.23
BNIP3-202ENST00000540159 EEF1DP29692 281 aaKnown RBP13.65□□□□□ -0.23
BNIP3-202ENST00000540159 FLT3LGP49771 235 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 CLCN5P51795 746 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 KPNA2P52292 529 aaKnown RBP13.65□□□□□ -0.23
BNIP3-202ENST00000540159 EIF4EBP2Q13542 120 aaPredicted RBP13.65□□□□□ -0.23
BNIP3-202ENST00000540159 HMBOX1Q6NT76 420 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 UGT3A1Q6NUS8 523 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 LGI2Q8N0V4 545 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 PAF1Q8N7H5 531 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 OR4K2Q8NGD2 314 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 ARRDC2Q8TBH0 407 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 UBXN10Q96LJ8 280 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 VPS45Q9NRW7 570 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 CNOT6Q9ULM6 557 aaKnown RBP13.65□□□□□ -0.23
BNIP3-202ENST00000540159 ASB1Q9Y576 335 aa13.65□□□□□ -0.23
BNIP3-202ENST00000540159 ARHGAP10A1A4S6 786 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 A8MX80 341 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 AP3B1O00203 1094 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 VILLO15195 856 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 ATXN1LP0C7T5 689 aaKnown RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 PABPC4LP0CB38 370 aaKnown RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 OXTRP30559 389 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 DUSP4Q13115 394 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 SQLEQ14534 574 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 ACAP2Q15057 778 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 C18orf21Q32NC0 220 aaPredicted RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 C6orf10Q5SRN2 563 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 ZBTB49Q6ZSB9 765 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 ZNF598Q86UK7 904 aaKnown RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 OFCC1Q8IZS5 231 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 TRIML2Q8N7C3 387 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 CALML6Q8TD86 181 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 SUSD3Q96L08 255 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 BTBD9Q96Q07 612 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 UNC93B1Q9H1C4 597 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 TUBB1Q9H4B7 451 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 MEAF6Q9HAF1 191 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 POLR3BQ9NW08 1133 aaPredicted RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 SPO11Q9Y5K1 396 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 COMMD10Q9Y6G5 202 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 NPEPPSL1A6NEC2 478 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 M0QZQ0 153 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 NME4O00746 187 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 KPNA6O60684 536 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 ZNF26P17031 533 aaPredicted RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 SEMG2Q02383 582 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 FRG1Q14331 258 aaKnown RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 GRM2Q14416 872 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 GLB1LQ6UWU2 654 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 CHST15Q7LFX5 561 aaPredicted RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 DHFR2Q86XF0 187 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 MARVELD2Q8N4S9 558 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 AFAP1L2Q8N4X5 818 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 OR6K2Q8NGY2 324 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 PRICKLE1Q96MT3 831 aaPredicted RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 FAM193BQ96PV7 902 aaPredicted RBP13.64□□□□□ -0.23
BNIP3-202ENST00000540159 SEPHS2Q99611 448 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 CCT7Q99832 543 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 GPR62Q9BZJ7 368 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 SPC25Q9HBM1 224 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 RNF11Q9Y3C5 154 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 MYO16Q9Y6X6 1858 aa13.64□□□□□ -0.23
BNIP3-202ENST00000540159 FOXD2O60548 495 aaPredicted RBP13.63□□□□□ -0.23
BNIP3-202ENST00000540159 CLASP2O75122 1294 aaKnown RBP13.63□□□□□ -0.23
BNIP3-202ENST00000540159 IMPDH1P20839 514 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 CLLU1OSQ5K130 101 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 ZFP1Q6P2D0 407 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 MON1AQ86VX9 555 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 FAM47BQ8NA70 645 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 CCDC97Q96F63 343 aaPredicted RBP13.63□□□□□ -0.23
BNIP3-202ENST00000540159 RNF112Q9ULX5 631 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 CBX4O00257 560 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 BTN3A1O00481 513 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 ANGPT2O15123 496 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 INPP4BO15327 924 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 NIPSNAP2O75323 286 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 CD1DP15813 335 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 GGT5P36269 586 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 PIK3CGP48736 1102 aa13.63□□□□□ -0.23
BNIP3-202ENST00000540159 TIAL1Q01085 375 aaKnown RBP eCLIP13.63□□□□□ -0.23
BNIP3-202ENST00000540159 CAP1Q01518 475 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms