RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 LATS2Q9NRM7 1088 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 OLAHQ9NV23 265 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ARMC1Q9NVT9 282 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 KLHL42Q9P2K6 505 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 TUBGCP4Q9UGJ1 667 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 CPSF3Q9UKF6 684 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 TMED5Q9Y3A6 229 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 FADS3Q9Y5Q0 445 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 RAD54BQ9Y620 910 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ACACBO00763 2458 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 A0A0A0MRY4 1105 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CCDC195A0A1B0GUA6 201 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM238LA0A1B0GVL6 79 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TCRBV3S1A0A5B6 114 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM150BA6NC51 233 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TRPC5OSA6NMA1 111 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 G3V2L1 256 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TPP1O14773 563 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 AXIN1O15169 862 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TIMM44O43615 452 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 NPHS1O60500 1241 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 UGT1A9O60656 530 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 LYPLA1O75608 230 aaPredicted RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 HSPA4LO95757 839 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 POLBP06746 335 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 ASGR2P07307 311 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 GALTP07902 379 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 MCF2P10911 925 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PDGFRAP16234 1089 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 XRCC1P18887 633 aaPredicted RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TFEBP19484 476 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 MYF6P23409 242 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PCSK6P29122 969 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PBX3P40426 434 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PTPN9P43378 593 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CSRP3P50461 194 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 THOP1P52888 689 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CDKL1Q00532 357 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PRKCEQ02156 737 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 RELAQ04206 551 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TUBA3CQ13748 450 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CEACAM7Q14002 265 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PCBP1Q15365 356 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 ANGPT1Q15389 498 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TARBP2Q15633 366 aaKnown RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 DPYSL2Q16555 572 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 SMTNL2Q2TAL5 461 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 ZNF699Q32M78 642 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CCDC14Q49A88 953 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CCDC92Q53HC0 331 aaPredicted RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 NOMO2Q5JPE7 1267 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TCHHL1Q5QJ38 904 aaPredicted RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 C1QTNF12Q5T7M4 302 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CYP4A22Q5TCH4 519 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PEAR1Q5VY43 1037 aaPredicted RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 SEL1L3Q68CR1 1132 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 DUS1LQ6P1R4 473 aaKnown RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 ZC3H14Q6PJT7 736 aaKnown RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 LCLAT1Q6UWP7 414 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 ZCCHC23Q6ZST2 131 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 NEK10Q6ZWH5 1172 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 FRA10AC1Q70Z53 315 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 GPR141Q7Z602 305 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 GPR180Q86V85 440 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 MINDY2Q8NBR6 621 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 DDHD1Q8NEL9 900 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CEP70Q8NHQ1 597 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PCDH19Q8TAB3 1148 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CHPT1Q8WUD6 406 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 RXFP2Q8WXD0 754 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 HSPH1Q92598 858 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CENPIQ92674 756 aaPredicted RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TFAP2CQ92754 450 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CCDC124Q96CT7 223 aaKnown RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 PGBD4Q96DM1 585 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM176AQ96HP8 235 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 ANKRD36BP1Q96IX9 119 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 SPATA13Q96N96 652 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CPXM1Q96SM3 734 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM175Q9BSA9 504 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TARS2Q9BW92 718 aaKnown RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 APOL5Q9BWW9 433 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 UNKQ9C0B0 810 aaKnown RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 C2orf40Q9H1Z8 148 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 SNX25Q9H3E2 840 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 COPS7BQ9H9Q2 264 aaPredicted RBP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 WDR41Q9HAD4 459 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 UGT1A7Q9HAW7 530 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 UGT1A10Q9HAW8 530 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 UGT1A8Q9HAW9 530 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 KCNK12Q9HB15 430 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 CYP4F11Q9HBI6 524 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 ZBTB26Q9HCK0 441 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TBC1D13Q9NVG8 400 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 OXSMQ9NWU1 459 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 RHBDL2Q9NX52 303 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TMEM216Q9P0N5 145 aa7.68□□□□□ -1.18
CCDC60-204ENST00000539847 TXNDC16Q9P2K2 825 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms