RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SAT2Q96F10 170 aaPredicted RBP3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 ALG14Q96F25 216 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 ZDHHC12Q96GR4 267 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 AJUBAQ96IF1 538 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF668Q96K58 619 aaPredicted RBP3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 CNOT6LQ96LI5 555 aaKnown RBP3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM227BQ96M60 508 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 C5orf34Q96MH7 638 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF830Q96NB3 372 aaPredicted RBP3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 GAL3ST4Q96RP7 486 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 KCNK16Q96T55 309 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 CD180Q99467 661 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 EIF3CQ99613 913 aaKnown RBP3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 FERMT1Q9BQL6 677 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 MGME1Q9BQP7 344 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 RHOXF2Q9BQY4 288 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 NUDT22Q9BRQ3 303 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC25A32Q9H2D1 315 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 CLSTN2Q9H4D0 955 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 CRLF2Q9HC73 371 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 TRPV5Q9NQA5 729 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 ADARB2Q9NS39 739 aaKnown RBP3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 INTS13Q9NVM9 706 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 CNIH4Q9P003 139 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 SH3BP4Q9P0V3 963 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 HMG20BQ9P0W2 317 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 AMACRQ9UHK6 382 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 GRID1Q9ULK0 1009 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 HPSEQ9Y251 543 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 NEU2Q9Y3R4 380 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 CHTOPQ9Y3Y2 248 aaKnown RBP3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 ENTPD2Q9Y5L3 495 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 CLCA3PQ9Y6N3 262 aa3.89□□□□□ -1.79
AC055720.1-201ENST00000539552 CASKIN1Q8WXD9 1431 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ITPR1Q14643 2758 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 COL4A5P29400 1685 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 HECTD1Q9ULT8 2610 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 LOC100509620A0A075B734 347 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 A0A1W2PPC1 479 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 OR2A25A4D2G3 310 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CTAGE15A4D2H0 777 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 KPNA7A9QM74 516 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 HNRNPCL2B2RXH8 293 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 KIF28PB7ZC32 967 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 KIF2AO00139 706 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC33A1O00400 549 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 LDLRAD4O15165 306 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ZSCAN9O15535 394 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 TOX4O94842 621 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CTAGE8P0CG41 777 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 VSIG10L2P0DP72 767 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 HSPA5P11021 654 aaKnown RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PIM1P11309 404 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CDK4P11802 303 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PDGFRAP16234 1089 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 GABRB1P18505 474 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 FPR1P21462 350 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 FBLP22087 321 aaKnown RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PRKAR1BP31321 381 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CSF2RBP32927 897 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 MAP2K2P36507 400 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 RPS19P39019 145 aaKnown RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 VIPR2P41587 438 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PTDSS1P48651 473 aaKnown RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 GZMKP49863 264 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PRKAG1P54619 331 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 KIAA1024LP59773 190 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 UFM1P61960 85 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 TRA2BP62995 288 aaKnown RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PRKCEQ02156 737 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 NHLH1Q02575 133 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PRKCZQ05513 592 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 DEUP1Q05D60 604 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PIGFQ07326 219 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 GOLGA8FQ08AF8 430 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ELP6Q0PNE2 266 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ZBTB17Q13105 803 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CHIT1Q13231 466 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CSHL1Q14406 222 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 KCNAB1Q14722 419 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 IQCB1Q15051 598 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 P3H1Q32P28 736 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 TWISTNBQ3B726 338 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 GAGE13Q4V321 117 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PLA1AQ53H76 456 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 UTP14CQ5TAP6 766 aaKnown RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SHEQ5VZ18 495 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PM20D1Q6GTS8 502 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CENPPQ6IPU0 288 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ISLR2Q6UXK2 745 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SYNE3Q6ZMZ3 975 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SEM1Q6ZVN7 128 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SPATA19Q7Z5L4 167 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CTAGE6Q86UF2 777 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM83AQ86UY5 434 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 GAS2L3Q86XJ1 694 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CTAGE4Q8IX94 777 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CDH26Q8IXH8 852 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM185AQ8N0U4 392 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 LRRC43Q8N309 656 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms