RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ASTLQ6HA08 431 aaPredicted RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 CGB2Q6NT52 195 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 MTSS1LQ765P7 747 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 NLRP9Q7RTR0 991 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 GALNT7Q86SF2 657 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 METTL3Q86U44 580 aaKnown RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 LONP2Q86WA8 852 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 YAF2Q8IY57 180 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 ARHGAP24Q8N264 748 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.87□□□□□ -0.99
DDB1-213ENST00000539332 ZNF557Q8N988 423 aaPredicted RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 ACDQ96AP0 544 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 FAM136AQ96C01 138 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 C2orf49Q9BVC5 232 aaPredicted RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 TBC1D10AQ9BXI6 508 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 TDRD1Q9BXT4 1180 aaKnown RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 HPS4Q9NQG7 708 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 ABCB8Q9NUT2 735 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 IL1RAPL1Q9NZN1 696 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 INTS6Q9UL03 887 aaKnown RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 ATG2BQ96BY7 2078 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 LDB2O43679 373 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 TROVE2P10155 538 aaKnown RBP eCLIP8.86□□□□□ -0.99
DDB1-213ENST00000539332 PYGBP11216 843 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 CRHR1P34998 444 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 BMPR2Q13873 1038 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 PDK4Q16654 411 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 HSP90AA5PQ58FG0 334 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 ESRP1Q6NXG1 681 aaKnown RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 NCEH1Q6PIU2 408 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 ARHGAP22Q7Z5H3 698 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 KIAA0907Q7Z7F0 614 aaPredicted RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 APCDD1Q8J025 514 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 SLC25A41Q8N5S1 370 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.86□□□□□ -0.99
DDB1-213ENST00000539332 NAT16Q8N8M0 369 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 OR13J1Q8NGT2 312 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 GDAP1Q8TB36 358 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 IFT43Q96FT9 208 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 TRMT61BQ9BVS5 477 aaKnown RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 SLC2A11Q9BYW1 496 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 NKX1-2Q9UD57 310 aaPredicted RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 SLC2A6Q9UGQ3 507 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 GGT7Q9UJ14 662 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 FBXO10Q9UK96 956 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 GRID1Q9ULK0 1009 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 PHTF1Q9UMS5 762 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 NUMBLQ9Y6R0 609 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 PIKFYVEQ9Y2I7 2098 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 TCF20Q9UGU0 1960 aaKnown RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 C2CD4DB7Z1M9 353 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 SLC7A4O43246 635 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 FZD6O60353 706 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 EDF1O60869 148 aaKnown RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 TULP3O75386 442 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 S100BP04271 92 aaPredicted RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 PAMP19021 973 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 GDI1P31150 447 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 SPRP35270 261 aaPredicted RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 AP1S1P61966 158 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 SLC34A1Q06495 639 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 RUNX3Q13761 415 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 CNGA3Q16281 694 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 GAB4Q2WGN9 574 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 FUT11Q495W5 492 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 PITRM1Q5JRX3 1037 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 MROH9Q5TGP6 573 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 OR52E8Q6IFG1 317 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 RETSATQ6NUM9 610 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 LINGO4Q6UY18 593 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 CDHR3Q6ZTQ4 885 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 KIAA0408Q6ZU52 694 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 C12orf40Q86WS4 652 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 ETFBKMTQ8IXQ9 262 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 C2CD4AQ8NCU7 369 aaPredicted RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 TCP10LQ8TDR4 215 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 STMN2Q93045 179 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 GBP5Q96PP8 586 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 SRPK1Q96SB4 655 aaKnown RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 AGAP2Q99490 1192 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 KLF6Q99612 283 aaPredicted RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 GPR22Q99680 433 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 MFSD1Q9H3U5 465 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 RHOJQ9H4E5 214 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 SCUBE2Q9NQ36 999 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 C20orf96Q9NUD7 363 aaPredicted RBP8.86□□□□□ -0.99
DDB1-213ENST00000539332 GTSE1Q9NYZ3 720 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 DLGAP2Q9P1A6 1054 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 TRIM33Q9UPN9 1127 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 CHKBQ9Y259 395 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 HS3ST2Q9Y278 367 aa8.86□□□□□ -0.99
DDB1-213ENST00000539332 GOLGA8RI6L899 631 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 ARNTLO00327 626 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 TRIM24O15164 1050 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 MAP3K7O43318 606 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 TIMM44O43615 452 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 ZNF821O75541 412 aaPredicted RBP8.85□□□□□ -0.99
DDB1-213ENST00000539332 MT-CO1P00395 513 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 PDHA1P08559 390 aa8.85□□□□□ -0.99
DDB1-213ENST00000539332 PABPC1P11940 636 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms