RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 BEST2Q8NFU1 509 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 RUFY2Q8WXA3 655 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 SYT17Q9BSW7 474 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 FSD1Q9BTV5 496 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 HEMGNQ9BXL5 484 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 ZNF700Q9H0M5 742 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 TTYH1Q9H313 450 aaPredicted RBP4.86□□□□□ -1.63
CCDC7-209ENST00000539197 NOD2Q9HC29 1040 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 TAGLN3Q9UI15 199 aa4.86□□□□□ -1.63
CCDC7-209ENST00000539197 WDR1O75083 606 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 BAG4O95429 457 aaKnown RBP4.85□□□□□ -1.63
CCDC7-209ENST00000539197 HOXC13P31276 330 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 HNRNPH2P55795 449 aaKnown RBP4.85□□□□□ -1.63
CCDC7-209ENST00000539197 PDE1BQ01064 536 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 VEPH1Q14D04 833 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 ADCK5Q3MIX3 580 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 SLC45A4Q5BKX6 768 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 SLC27A1Q6PCB7 646 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 KCTD18Q6PI47 426 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-209ENST00000539197 ASB18Q6ZVZ8 466 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 SPICE1Q8N0Z3 855 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 TRAPPC12Q8WVT3 735 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 POLR3CQ9BUI4 534 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-209ENST00000539197 PHF7Q9BWX1 381 aaPredicted RBP4.85□□□□□ -1.63
CCDC7-209ENST00000539197 MAGEE1Q9HCI5 957 aa4.85□□□□□ -1.63
CCDC7-209ENST00000539197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.85□□□□□ -1.63
CCDC7-209ENST00000539197 LSM4Q9Y4Z0 139 aaKnown RBP4.85□□□□□ -1.63
CCDC7-209ENST00000539197 DDX5P17844 614 aaKnown RBP4.84□□□□□ -1.63
CCDC7-209ENST00000539197 MMP14P50281 582 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 TDGQ13569 410 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 GTF2H2Q13888 395 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 ANKRD1Q15327 319 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 TAF11Q15544 211 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 SIRPB2Q5JXA9 342 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 SFMBT2Q5VUG0 894 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 GTF2H2CQ6P1K8 395 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 RAD9BQ6WBX8 426 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 LINGO2Q7L985 606 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 TDRPQ86YL5 185 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 LSM14AQ8ND56 463 aaKnown RBP4.84□□□□□ -1.63
CCDC7-209ENST00000539197 HMGCLL1Q8TB92 370 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 SPPL3Q8TCT6 385 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 SLC39A13Q96H72 371 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 ZNF599Q96NL3 588 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 MMP25Q9NPA2 562 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 IL1RAPL1Q9NZN1 696 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 KIAA1456Q9P272 454 aa4.84□□□□□ -1.63
CCDC7-209ENST00000539197 CNPP09543 421 aaKnown RBP4.83□□□□□ -1.64
CCDC7-209ENST00000539197 MAOAP21397 527 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 SHMT1P34896 483 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 GAGE5Q13069 117 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 GAGE6Q13070 117 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 ADGRG6Q86SQ4 1221 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 LYG1Q8N1E2 194 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 ZCCHC9Q8N567 271 aaKnown RBP4.83□□□□□ -1.64
CCDC7-209ENST00000539197 USP38Q8NB14 1042 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 ST6GAL2Q96JF0 529 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 ZNF354BQ96LW1 612 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 BBS4Q96RK4 519 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 MTERF1Q99551 399 aaKnown RBP4.83□□□□□ -1.64
CCDC7-209ENST00000539197 SH3GL2Q99962 352 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 PYGO2Q9BRQ0 406 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 TAOK3Q9H2K8 898 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 FBXO9Q9UK97 447 aaPredicted RBP4.83□□□□□ -1.64
CCDC7-209ENST00000539197 DLGAP4Q9Y2H0 992 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 LOXL2Q9Y4K0 774 aa4.83□□□□□ -1.64
CCDC7-209ENST00000539197 TMEM202A6NGA9 273 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 BDKRB2P30411 391 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 DCTP40126 519 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 LPAL2Q16609 132 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 TCTN1Q2MV58 587 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 ANKRD45Q5TZF3 282 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 TADA2BQ86TJ2 420 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 ZBTB2Q8N680 514 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 ELP4Q96EB1 424 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 TKTL2Q9H0I9 626 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 PPP1R3EQ9H7J1 279 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 UPF2Q9HAU5 1272 aaKnown RBP4.82□□□□□ -1.64
CCDC7-209ENST00000539197 GPR108Q9NPR9 543 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 OGFRQ9NZT2 677 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 PRSS21Q9Y6M0 314 aa4.82□□□□□ -1.64
CCDC7-209ENST00000539197 SMIM1B2RUZ4 78 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 HEXAP06865 529 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 ZNF10P21506 573 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-209ENST00000539197 CHRNB4P30926 498 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 METAP2P50579 478 aaKnown RBP eCLIP4.81□□□□□ -1.64
CCDC7-209ENST00000539197 ATF7IPQ6VMQ6 1270 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 STXBP4Q6ZWJ1 553 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 SPATA6LQ8N4H0 392 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 HCAR2Q8TDS4 363 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 TM9SF4Q92544 642 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 SCRN2Q96FV2 425 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 ASCL2Q99929 193 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 LBHD1Q9BQE6 289 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-209ENST00000539197 BPIFA1Q9NP55 256 aa4.81□□□□□ -1.64
CCDC7-209ENST00000539197 MAP3K20Q9NYL2 800 aaKnown RBP4.81□□□□□ -1.64
CCDC7-209ENST00000539197 TTC7AQ9ULT0 858 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-209ENST00000539197 FAM96BQ9Y3D0 163 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms