RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 PM20D2Q8IYS1 436 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 OR7D4Q8NG98 312 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 OR10T2Q8NGX3 314 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 BCL7CQ8WUZ0 217 aaPredicted RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 FAR1Q8WVX9 515 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 SLC7A6Q92536 515 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 ZNF566Q969W8 418 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.44□□□□□ -0.422e-7■■■■□ 19.6
USP3-203ENST00000538686 DYNLL2Q96FJ2 89 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 HSFY1Q96LI6 401 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 RSAD1Q9HA92 442 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 RBAKQ9NYW8 714 aaPredicted RBP12.44□□□□□ -0.42
USP3-203ENST00000538686 OPTCQ9UBM4 332 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 MAFFQ9ULX9 164 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 KCNH4Q9UQ05 1017 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 BCS1LQ9Y276 419 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 AXIN2Q9Y2T1 843 aa12.44□□□□□ -0.42
USP3-203ENST00000538686 CLDN24A6NM45 220 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 MRPS14O60783 128 aaKnown RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 KATNA1O75449 491 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 UGT2B17O75795 530 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 CNTN5O94779 1100 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 OR5F1O95221 314 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 MPOP05164 745 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 THRBP10828 461 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 IL1R1P14778 569 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 TCF4P15884 667 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 PTX3P26022 381 aaPredicted RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 LRPAP1P30533 357 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 GMPRP36959 345 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 HAAOP46952 286 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 POLD2P49005 469 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 ACOT2P49753 483 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 SLC7A2P52569 658 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 UGT2B15P54855 530 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 POLR2GP62487 172 aaKnown RBP eCLIP12.43□□□□□ -0.42
USP3-203ENST00000538686 GALEQ14376 348 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 PPP1R3AQ16821 1122 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 TPRG1LQ5T0D9 272 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 SYT6Q5T7P8 510 aaPredicted RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 DNAJC24Q6P3W2 148 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 NAPRTQ6XQN6 538 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 UTS2BQ765I0 119 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 LILRB2Q8N423 598 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 PARP16Q8N5Y8 322 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 CHDHQ8NE62 594 aaPredicted RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 ZNF555Q8NEP9 628 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 SPATA18Q8TC71 538 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 DEDD2Q8WXF8 326 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 KAT6AQ92794 2004 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 LGALS12Q96DT0 336 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 RTP4Q96DX8 246 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 B3GALT6Q96L58 329 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 MAGEB10Q96LZ2 347 aaPredicted RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 ROGDIQ9GZN7 287 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 NXF2Q9GZY0 626 aaKnown RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 PCIF1Q9H4Z3 704 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 KAT8Q9H7Z6 458 aaKnown RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 NGRNQ9NPE2 291 aaKnown RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 SAE1Q9UBE0 346 aaPredicted RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 GABBR1Q9UBS5 961 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 TMCC3Q9ULS5 477 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 MTF2Q9Y483 593 aaPredicted RBP12.43□□□□□ -0.42
USP3-203ENST00000538686 PCDHGB6Q9Y5F9 930 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 PCDHGB2Q9Y5G2 931 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 PEX16Q9Y5Y5 336 aa12.43□□□□□ -0.42
USP3-203ENST00000538686 USP17L5A8MUK1 530 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 G3V2L1 256 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 K7ENM7 598 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 TSPAN4O14817 238 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 NRP2O60462 931 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 MAFO75444 373 aaPredicted RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 ZNF30P17039 623 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 HTR7P34969 479 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 MAGEA12P43365 314 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 SLC12A2P55011 1212 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 CCNA1P78396 465 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 SEMA5AQ13591 1074 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 LIPMQ5VYY2 423 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 TMEM198Q66K66 360 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 DENND5AQ6IQ26 1287 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 BEND5Q7L4P6 421 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 RFX6Q8HWS3 928 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 SYTL1Q8IYJ3 562 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 PELI3Q8N2H9 469 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 VANGL1Q8TAA9 524 aaPredicted RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 ADAM32Q8TC27 787 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 SIGLEC10Q96LC7 697 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 USB1Q9BQ65 265 aaKnown RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 GATA5Q9BWX5 397 aaPredicted RBP12.42□□□□□ -0.42
USP3-203ENST00000538686 UCK2Q9BZX2 261 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 BCAS3Q9H6U6 928 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 FAM105AQ9NUU6 356 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 OXSMQ9NWU1 459 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 EHD3Q9NZN3 535 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 ABCD2Q9UBJ2 740 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 SLC9A2Q9UBY0 812 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 KLHL21Q9UJP4 597 aa12.42□□□□□ -0.42
USP3-203ENST00000538686 LOXHD1Q8IVV2 1947 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms