RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 UNC5BQ8IZJ1 945 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 NAGSQ8N159 534 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 PDCD6IPQ8WUM4 868 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 NSMCE3Q96MG7 304 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 CATSPER2Q96P56 530 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 CTRCQ99895 268 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 FRMD8Q9BZ67 464 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 ASPSCR1Q9BZE9 553 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 VPS16Q9H269 839 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 SAMSN1Q9NSI8 373 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 TRNAU1APQ9NX07 287 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 PLAAQ9Y263 795 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 MAN2B2Q9Y2E5 1009 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 NOTCH2Q04721 2471 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 SIGLEC16A6NMB1 481 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 EEF2KO00418 725 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 TRAFD1O14545 582 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 EPHB6O15197 1021 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 ADCY8P40145 1251 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 ETV3P41162 512 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 ACTR1BP42025 376 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 AIF1P55008 147 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 JAM2P57087 298 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 ACTR1AP61163 376 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 CDK3Q00526 305 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 CDC20Q12834 499 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 BECN1Q14457 450 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 CLEC16AQ2KHT3 1053 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 TCP11X2Q5H9J9 407 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 RAET1GQ6H3X3 334 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 MON1BQ7L1V2 547 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 PHF13Q86YI8 300 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 KIAA1143Q96AT1 154 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 SLC45A3Q96JT2 553 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 CNPY3Q9BT09 278 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 TEX101Q9BY14 249 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 DHX35Q9H5Z1 703 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 PILRAQ9UKJ1 303 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 AP4E1Q9UPM8 1137 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 PLEKHM1Q9Y4G2 1056 aa13.98□□□□□ -0.17
SMARCA4-206ENST00000538456 TRBV23OR9-2A0A075B6M9 112 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 CLEC18AA5D8T8 446 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 A8MU76 341 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 B4E171 279 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 ERCC5P28715 1186 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 OAS2P29728 719 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 VIPR1P32241 457 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 TSPAN7P41732 249 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 RAB15P59190 212 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 AP1S1P61966 158 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 SYCP1Q15431 976 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 CA9Q16790 459 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 DEFB109BQ30KR1 87 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 ATP1A1-AS1Q5TC04 95 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 CLEC18BQ6UXF7 455 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 HSD11B1LQ7Z5J1 315 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 NLGN4XQ8N0W4 816 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 FAM26EQ8N5C1 309 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 NPWQ8N729 165 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 CLEC18CQ8NCF0 446 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 NLGN4YQ8NFZ3 816 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 FNIP1Q8TF40 1166 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 RTP4Q96DX8 246 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 DTD2Q96FN9 168 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 ABHD17AQ96GS6 310 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 AHCYL2Q96HN2 611 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 DONSONQ9NYP3 566 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 PCDHGC4Q9Y5F7 938 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 ICE1Q9Y2F5 2266 aa13.97□□□□□ -0.17
SMARCA4-206ENST00000538456 LOC101059948A0A1B0GTJ6 334 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 TCRBV5S1A1TA0A578 114 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 BLACEA4D250 179 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 CAPN5O15484 640 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 DAPK3O43293 454 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 CPP00450 1065 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 LHCGRP22888 699 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 HTR7P34969 479 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 OGDHQ02218 1023 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 NSUN2Q08J23 767 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 PTPRRQ15256 657 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 LACTB2Q53H82 288 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 C16orf46Q6P387 395 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 TMEM71Q6P5X7 295 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 DCUN1D2Q6PH85 259 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 Q6ZVL8 140 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 MARK2Q7KZI7 788 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 KDELC2Q7Z4H8 507 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 TRIM74Q86UV6 250 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 ARHGAP12Q8IWW6 846 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 BMPERQ8N8U9 685 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 APOBEC4Q8WW27 367 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 OR2M4Q96R27 311 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 SLC38A3Q99624 504 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 DPYSL5Q9BPU6 564 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 SLC17A4Q9Y2C5 497 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 TMEM98Q9Y2Y6 226 aa13.96□□□□□ -0.17
SMARCA4-206ENST00000538456 MYO9AB2RTY4 2548 aa13.95□□□□□ -0.18
SMARCA4-206ENST00000538456 A0A0U1RQS6 177 aa13.95□□□□□ -0.18
SMARCA4-206ENST00000538456 NPIPB15A6NHN6 443 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms