RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 KIAA1211LQ6NV74 962 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NEPROQ6NW34 567 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 AFTPHQ6ULP2 937 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CRTC1Q6UUV9 634 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 DPPA4Q7L190 304 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TMEM135Q86UB9 458 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FAM124AQ86V42 546 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KBTBD6Q86V97 674 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LRRC6Q86X45 466 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBC1D3Q8IZP1 549 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MDGA1Q8NFP4 955 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 OR13C4Q8NGS5 318 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 OR4L1Q8NH43 312 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 GDAP1Q8TB36 358 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 EZH1Q92800 747 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PEX13Q92968 403 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ECHDC3Q96DC8 303 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBATAQ96M53 351 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SMIM14Q96QK8 99 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TRIM56Q9BRZ2 755 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SPATA16Q9BXB7 569 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HDAC8Q9BY41 377 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FOXQ1Q9C009 403 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CCDC68Q9H2F9 335 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ACSS3Q9H6R3 686 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CATSPERZQ9NTU4 200 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 POLR3BQ9NW08 1133 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SLC2A6Q9UGQ3 507 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TBK1Q9UHD2 729 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RABGEF1Q9UJ41 708 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CRLS1Q9UJA2 301 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HCN2Q9UL51 889 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LHX6Q9UPM6 363 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SIT1Q9Y3P8 196 aa10.66□□□□□ -0.7
TNFRSF1A-211ENST00000538363 GLYATL1P3A0A0U1RQE8 302 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MROH6A6NGR9 719 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 GOLGA8KD6RF30 607 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 GOLGA8TH3BQL2 631 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TNFRSF10AO00220 468 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CCL22O00626 93 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 AURKAO14965 403 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CD3EAPO15446 510 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SLC7A4O43246 635 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TSPAN6O43657 245 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LDB2O43679 373 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KRT37O76014 449 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 KRT38O76015 456 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 GOT2P00505 430 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SHBGP04278 402 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 NUDT17P0C025 328 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 COL9A1P20849 921 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MC4RP32245 332 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 HMGCLP35914 325 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 P2RY2P41231 377 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LIG3P49916 1009 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SERPINB9P50453 376 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZXDAP98168 799 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZBTB16Q05516 673 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PTPRCAPQ14761 206 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PTPRRQ15256 657 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CRY1Q16526 586 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 STEAP4Q687X5 459 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FAM151BQ6UXP7 276 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 STRA8Q7Z7C7 330 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 TSPAN33Q86UF1 283 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SLC26A11Q86WA9 606 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ZSWIM9Q86XI8 627 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 LMNTD2Q8IXW0 634 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 AGGF1Q8N302 714 aaeCLIP10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 EPS8L3Q8TE67 593 aaKnown RBP10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 CDKN2AIPNLQ96HQ2 116 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PKNOX2Q96KN3 472 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FCRL3Q96P31 734 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 C1QTNF7Q9BXJ2 289 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FAM83DQ9H4H8 585 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 ASB8Q9H765 288 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 IL1RAPL1Q9NZN1 696 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 VPS18Q9P253 973 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 PSMC3IPQ9P2W1 217 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 SLC24A2Q9UI40 661 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 FKBPLQ9UIM3 349 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 RIMKLBQ9ULI2 386 aa10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 MTF2Q9Y483 593 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF1A-211ENST00000538363 XIRP2A4UGR9 3374 aa10.65□□□□□ -0.71
TNFRSF1A-211ENST00000538363 A0A0U1RQS6 177 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 UBA6A0AVT1 1052 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 TSPAN11A1L157 253 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CCDC162PA2VCL2 907 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 LRRC72A6NJI9 287 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 WNT9AO14904 365 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 MMP20O60882 483 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 ADAM23O75077 832 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 NDUFS2O75306 463 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 CDH16O75309 829 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 TM7SF2O76062 418 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 MT-ND3P03897 115 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SAT1P21673 171 aa10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 SPRP35270 261 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF1A-211ENST00000538363 PTPN5P54829 565 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms