RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 OTOP2Q7RTS6 562 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 BPIFB6Q8NFQ5 453 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 OR4A15Q8NGL6 344 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 ZNF563Q8TA94 476 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 UBASH3BQ8TF42 649 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 TOR4AQ9NXH8 423 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 ERVW-1Q9UQF0 538 aa16.82■□□□□ 0.28
SCARB1-205ENST00000538291 PTPRJQ12913 1337 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 PSMG1O95456 288 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 UGT1A5P35504 534 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 SPATA6LQ8N4H0 392 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-205ENST00000538291 RPP40O75818 363 aaKnown RBP16.81■□□□□ 0.28
SCARB1-205ENST00000538291 OR4Q2P0C623 313 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 GABRB2P47870 512 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 ATP1A4Q13733 1029 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 DEF8Q6ZN54 512 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 FBXW8Q8N3Y1 598 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 LRRN4Q8WUT4 740 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 MAML3Q96JK9 1138 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 SGK2Q9HBY8 427 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 TAS2R40P59535 323 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 TEFMQ96QE5 360 aaKnown RBP16.81■□□□□ 0.28
SCARB1-205ENST00000538291 MCMBPQ9BTE3 642 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 ELOVL2Q9NXB9 296 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 RCOR3Q9P2K3 495 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-205ENST00000538291 LOC102724159A0A0B4J2E5 919 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 BANF1O75531 89 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 HNRNPLP14866 589 aaKnown RBP eCLIP16.81■□□□□ 0.281e-7■■■■□ 21.9
SCARB1-205ENST00000538291 WASP42768 502 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 MARCKSL1P49006 195 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 ERVK-21P61565 698 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 SLC25A3Q00325 362 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 PWP2Q15269 919 aaKnown RBP16.81■□□□□ 0.28
SCARB1-205ENST00000538291 NDUFA5Q16718 116 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 PLA2G4EQ3MJ16 856 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 ATP13A5Q4VNC0 1218 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 C9orf64Q5T6V5 341 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-205ENST00000538291 METTL21AQ8WXB1 218 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 TRMOQ9BU70 441 aa16.81■□□□□ 0.28
SCARB1-205ENST00000538291 FSCN2O14926 492 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TFPIP10646 304 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 CDH5P33151 784 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TSHZ1Q6ZSZ6 1077 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 PROSER1Q86XN7 944 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 OR14C36Q8NHC7 312 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 COLEC10Q9Y6Z7 277 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 PTPN9P43378 593 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 YBEYP58557 167 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 PPIDQ08752 370 aaKnown RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 INTS6LQ5JSJ4 861 aaKnown RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 GALNT18Q6P9A2 607 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TSEN2Q8NCE0 465 aaKnown RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 IRGQQ8WZA9 623 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 RAD51AP1Q96B01 352 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 RHOJQ9H4E5 214 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 SAMHD1Q9Y3Z3 626 aaKnown RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 FAM237AA0A1B0GTK4 181 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TREHO43280 583 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 SUV39H1O43463 412 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 RHOQP17081 205 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TACR2P21452 398 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 IL12RB1P42701 662 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 DRG2P55039 364 aaKnown RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 PEX5LQ8IYB4 626 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 SRFBP1Q8NEF9 429 aaKnown RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 ADAMTS15Q8TE58 950 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 ZNF184Q99676 751 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 CRNNQ9UBG3 495 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 EVLQ9UI08 416 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 RBM7Q9Y580 266 aaKnown RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 ABHD14A-ACY1A0A1B0GW23 586 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 IFNGP01579 166 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 SPAM1P38567 509 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 GPD2P43304 727 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 RFTN2Q52LD8 501 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TEX44Q53QW1 395 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 MZT2BQ6NZ67 158 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 GALNT13Q8IUC8 556 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 MCEMP1Q8IX19 187 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 OR10H5Q8NGA6 315 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 JOSD2Q8TAC2 188 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 AP2M1Q96CW1 435 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 RAI2Q9Y5P3 530 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 PKMP14618 531 aaKnown RBP16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TNFRSF8P28908 595 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TTKP33981 857 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 MAPK10P53779 464 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 SLC5A3P53794 718 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 TAS2R41P59536 307 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 CPTPQ5TA50 214 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 LBX2Q6XYB7 198 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 FNIP1Q8TF40 1166 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 SLC4A9Q96Q91 983 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 ABCG8Q9H221 673 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 HMG20AQ9NP66 347 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 DNAJC11Q9NVH1 559 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 EHD3Q9NZN3 535 aa16.8■□□□□ 0.28
SCARB1-205ENST00000538291 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms