RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 MBL2P11226 248 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 COL6A2P12110 1019 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 HLA-DPA1P20036 260 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 DNAJB1P25685 340 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 FSCBQ5H9T9 825 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 RNF219Q5W0B1 726 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 TXNDC8Q6A555 127 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ZYG11AQ6WRX3 759 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 PTAR1Q7Z6K3 402 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 LCA5Q86VQ0 697 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 CILP2Q8IUL8 1156 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 SPATA6LQ8N4H0 392 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ARL14EPQ8N8R7 260 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 STYXQ8WUJ0 223 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 HLA-CQ95604 372 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ARMC5Q96C12 935 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 NXNL1Q96CM4 212 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 MOCOSQ96EN8 888 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 OLFM1Q99784 485 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 S100A14Q9HCY8 104 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 OXSMQ9NWU1 459 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ACOT9Q9Y305 439 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ARL5AQ9Y689 179 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ZMPSTE24O75844 475 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 S1PR4O95977 384 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 PRLP01236 227 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 SERPINF2P08697 491 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 PIRTP0C851 137 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 STMN1P16949 149 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 PEX2P28328 305 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 GLRBP48167 497 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 AQP4P55087 323 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 SMAD3P84022 425 aaKnown RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 ARF5P84085 180 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 ASPHQ12797 758 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 CCNIQ14094 377 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 RFTN1Q14699 578 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 SLC14A2Q15849 920 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 LIN52Q52LA3 116 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 VWA5B1Q5TIE3 1220 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 Q6ZNB5 142 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 LDB1Q86U70 411 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 PDSS2Q86YH6 399 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 RNF135Q8IUD6 432 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 HERC6Q8IVU3 1022 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 FSTL5Q8N475 847 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 SLC26A7Q8TE54 656 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 PPP2R3CQ969Q6 453 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 EXOC2Q96KP1 924 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 TBATAQ96M53 351 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 YME1L1Q96TA2 773 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 NDNQ99608 321 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 CINPQ9BW66 212 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 GATA5Q9BWX5 397 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 LRRC3Q9BY71 257 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 FAM192AQ9GZU8 254 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 ZBP1Q9H171 429 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 TRPC7Q9HCX4 862 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 PRKAG2Q9UGJ0 569 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 PCDHB12Q9Y5F1 795 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 INSIG1O15503 277 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 TGM5O43548 720 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 TRIM13O60858 407 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 EFCAB14O75071 495 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 NDST3O95803 873 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 CNPP09543 421 aaKnown RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 CD1EP15812 388 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 ALOX15P16050 662 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 AOC1P19801 751 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 POU4F1Q01851 419 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 LRRC8EQ6NSJ5 796 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 OTOP2Q7RTS6 562 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 GALNT7Q86SF2 657 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 DHDDSQ86SQ9 333 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 GPR65Q8IYL9 337 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 OR13C4Q8NGS5 318 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 RDH11Q8TC12 318 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 CALML6Q8TD86 181 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 BLOC1S5Q8TDH9 187 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 DNAJC1Q96KC8 554 aaKnown RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 SMIM14Q96QK8 99 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 C1orf21Q9H246 121 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 GPAMQ9HCL2 828 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 ACSS2Q9NR19 701 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 PACSIN3Q9UKS6 424 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 MAFFQ9ULX9 164 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 SPO11Q9Y5K1 396 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 OR51B4Q9Y5P0 310 aa10.75□□□□□ -0.69
CLIP1-210ENST00000538120 MKI67P46013 3256 aaKnown RBP10.75□□□□□ -0.69
CLIP1-210ENST00000538120 ANAPC1Q9H1A4 1944 aa10.74□□□□□ -0.69
CLIP1-210ENST00000538120 LOC100653049A0A140TA62 436 aa10.74□□□□□ -0.69
CLIP1-210ENST00000538120 CBX4O00257 560 aa10.74□□□□□ -0.69
CLIP1-210ENST00000538120 SNAP91O60641 907 aa10.74□□□□□ -0.69
CLIP1-210ENST00000538120 TBL1XO60907 577 aa10.74□□□□□ -0.69
CLIP1-210ENST00000538120 KRT34O76011 436 aa10.74□□□□□ -0.69
CLIP1-210ENST00000538120 FGF18O76093 207 aa10.74□□□□□ -0.69
CLIP1-210ENST00000538120 KLHL2O95198 593 aa10.74□□□□□ -0.69
CLIP1-210ENST00000538120 WISP3O95389 354 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms