RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ST14Q9Y5Y6 855 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 TNRC6AQ8NDV7 1962 aaKnown RBP11.13□□□□□ -0.63
CLPB-208ENST00000538021 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
CLPB-208ENST00000538021 SHANK1Q9Y566 2161 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 GNA14O95837 355 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 PLEKP08567 350 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 CD44P16070 742 aaKnown RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 GM2AP17900 193 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 ERCC5P28715 1186 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 SCNN1AP37088 669 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 ADCY8P40145 1251 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 POLD2P49005 469 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 PGDP52209 483 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 NRG1Q02297 640 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 FOXM1Q08050 763 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 MAP7Q14244 749 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 INPP5JQ15735 1006 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 PRR30Q53SZ7 412 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 DENND2CQ68D51 928 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 TTI2Q6NXR4 508 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 DOK6Q6PKX4 331 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 C6orf15Q6UXA7 325 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 CREBRFQ8IUR6 639 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 EMC1Q8N766 993 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 NELFBQ8WX92 580 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 SHC3Q92529 594 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 NUS1Q96E22 293 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 TRIM55Q9BYV6 548 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 SLC29A3Q9BZD2 475 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 NOL6Q9H6R4 1146 aaKnown RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 LUZP4Q9P127 313 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 RCOR3Q9P2K3 495 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 UBA2Q9UBT2 640 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 APEX2Q9UBZ4 518 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 ERRFI1Q9UJM3 462 aaPredicted RBP11.12□□□□□ -0.63
CLPB-208ENST00000538021 NEU3Q9UQ49 428 aa11.12□□□□□ -0.63
CLPB-208ENST00000538021 AKAP9Q99996 3911 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 POLQO75417 2590 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 OTOGQ6ZRI0 2925 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 A6NCN8 305 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 WIPF3A6NGB9 483 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 RASA4BC9J798 803 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 RASA4O43374 803 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 LDLRP01130 860 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 PNMA6AP0CW24 399 aaPredicted RBP11.11□□□□□ -0.63
CLPB-208ENST00000538021 ZNF28P17035 718 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 SERPINA4P29622 427 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 CLCN1P35523 988 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 GABRB2P47870 512 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 MARSP56192 900 aaKnown RBP11.11□□□□□ -0.63
CLPB-208ENST00000538021 SEMA5AQ13591 1074 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 C15orf59Q2T9L4 293 aaPredicted RBP11.11□□□□□ -0.63
CLPB-208ENST00000538021 AFMIDQ63HM1 303 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 WDR74Q6RFH5 385 aaPredicted RBP11.11□□□□□ -0.63
CLPB-208ENST00000538021 DPPA4Q7L190 304 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 GALNT6Q8NCL4 622 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 SLC37A2Q8TED4 501 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 MOCOSQ96EN8 888 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 STAMBPL1Q96FJ0 436 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 TCTN2Q96GX1 697 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 TUBGCP5Q96RT8 1024 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 SLC25A23Q9BV35 468 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 FRMD8Q9BZ67 464 aaPredicted RBP11.11□□□□□ -0.63
CLPB-208ENST00000538021 ATP13A3Q9H7F0 1226 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 METTL5Q9NRN9 209 aaKnown RBP11.11□□□□□ -0.63
CLPB-208ENST00000538021 KCND3Q9UK17 655 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 TMEM59LQ9UK28 342 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 CTNND2Q9UQB3 1225 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 HIVEP3Q5T1R4 2406 aa11.11□□□□□ -0.63
CLPB-208ENST00000538021 ZNF106Q9H2Y7 1883 aaKnown RBP11.1□□□□□ -0.63
CLPB-208ENST00000538021 BICDL2A1A5D9 508 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 FOXN3O00409 490 aaPredicted RBP11.1□□□□□ -0.63
CLPB-208ENST00000538021 CREG1O75629 220 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 SORBS2O94875 1100 aaKnown RBP11.1□□□□□ -0.63
CLPB-208ENST00000538021 MAP3K6O95382 1288 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 EPHB2P29323 1055 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 CASP14P31944 242 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 FASLGP48023 281 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 STX17P56962 302 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 POLR2LP62875 67 aaKnown RBP11.1□□□□□ -0.63
CLPB-208ENST00000538021 CDK3Q00526 305 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 CHAF1BQ13112 559 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 NFATC2Q13469 925 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 GBP6Q6ZN66 633 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 SRLQ86TD4 932 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 APLFQ8IW19 511 aaPredicted RBP11.1□□□□□ -0.63
CLPB-208ENST00000538021 TP53INP2Q8IXH6 220 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 CCDC185Q8N715 623 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 RTL3Q8N8U3 475 aaKnown RBP11.1□□□□□ -0.63
CLPB-208ENST00000538021 ELMO2Q96JJ3 720 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 C5orf34Q96MH7 638 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 TEX101Q9BY14 249 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 SLAMF7Q9NQ25 335 aa11.1□□□□□ -0.63
CLPB-208ENST00000538021 AJAP1Q9UKB5 411 aaPredicted RBP11.1□□□□□ -0.63
CLPB-208ENST00000538021 J3KR12 359 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 KIAA0754O94854 1291 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 IVLP07476 585 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 CCNYL3P0C7X3 344 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 SDC4P31431 198 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms