RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FRMPD4Q14CM0 1322 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SCAMP1O15126 338 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 CSH1P0DML2 217 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 CSH2P0DML3 217 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 RPS9P46781 194 aaKnown RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TPRG1LQ5T0D9 272 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 HECTD3Q5T447 861 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 SLFN11Q7Z7L1 901 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 SPATA2LQ8IUW3 424 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TNFRSF25Q93038 417 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ARMC5Q96C12 935 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 EBNA1BP2Q99848 306 aaKnown RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 BTG4Q9NY30 223 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 MAGI3Q5TCQ9 1506 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 OTOGLQ3ZCN5 2332 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 FBXO21O94952 628 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 NTRK1P04629 796 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 RPLP0P05388 317 aaKnown RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 AQP1P29972 269 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TIE1P35590 1138 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 KLRC3Q07444 240 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ANKDD1AQ495B1 522 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 PRAMEF17Q5VTA0 474 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 FAM131BQ86XD5 332 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ABRAQ8N0Z2 381 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ISOC1Q96CN7 298 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 PCDHGC3Q9UN70 934 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ANGPT4Q9Y264 503 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 IGSF1Q8N6C5 1336 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ERN1O75460 977 aaKnown RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 CTSKP43235 329 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 CBFBQ13951 182 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ANGEL2Q5VTE6 544 aaKnown RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 REP15Q6BDI9 236 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 SYNE4Q8N205 404 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 DNAJA4Q8WW22 397 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 LPGAT1Q92604 370 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TCEAL3Q969E4 200 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 AP1S3Q96PC3 154 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 BEX2Q9BXY8 128 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 MIEF1Q9NQG6 463 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 GDAP2Q9NXN4 497 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 RAP2CQ9Y3L5 183 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TRAV6A0A075B6T7 132 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 MYCLP1P12525 358 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 IL7P13232 177 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 FMO4P31512 558 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 RAPSNQ13702 412 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ACOT1Q86TX2 421 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 GHDCQ8N2G8 530 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 C10orf82Q8WW14 230 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TMEM246Q9BRR3 403 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ASTN2O75129 1339 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 LOC100509620A0A075B734 347 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 CHP2O43745 196 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TSPAN3O60637 253 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 PORP16435 677 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 RGS19P49795 217 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ARHGDIBP52566 201 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF662Q6ZS27 426 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TMEM139Q8IV31 216 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF366Q8N895 744 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 BPIFB1Q8TDL5 484 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 HTR3CQ8WXA8 447 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 RFT1Q96AA3 541 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 CD93Q9NPY3 652 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ITM2CQ9NQX7 267 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 DNAJC28Q9NX36 388 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 POLIQ9UNA4 740 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 FABP12A6NFH5 140 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 FFAR3O14843 346 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 GPR42O15529 346 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 FGRP09769 529 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ATP5F1P24539 256 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 STOMP27105 288 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ACTR3P61158 418 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TSPAN5P62079 268 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 UBE2UQ5VVX9 321 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 OXR1Q8N573 874 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 POMGNT2Q8NAT1 580 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 MFHAS1Q9Y4C4 1052 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 KIF13BQ9NQT8 1826 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TSPAN1O60635 241 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 FAM155BO75949 473 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 IFNA6P05013 189 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 CCNYL3P0C7X3 344 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 SLC2A2P11168 524 aaPredicted RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 CYP3A5P20815 502 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 HARS2P49590 506 aaKnown RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 SSX2Q16385 188 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 AADACL4Q5VUY2 407 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ATG9AQ7Z3C6 839 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 TEX19Q8NA77 164 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 POP5Q969H6 163 aaKnown RBP5.66□□□□□ -1.5
CSMD1-215ENST00000537824 HDAC10Q969S8 669 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 BBS4Q96RK4 519 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 BEX1Q9HBH7 125 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 ERVK-5Q9HDB9 667 aa5.66□□□□□ -1.5
CSMD1-215ENST00000537824 MTMR10Q9NXD2 777 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms