RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 DTX3LQ8TDB6 740 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 ALG14Q96F25 216 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 CATSPER2Q96P56 530 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 DERL2Q9GZP9 239 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 STK39Q9UEW8 545 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 H3BMM5 538 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 FZD6O60353 706 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 SORBS2O94875 1100 aaKnown RBP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 PIRTP0C851 137 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 RFC2P35250 354 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 ALDH1A3P47895 512 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 ATP4BP51164 291 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 BLMHQ13867 455 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 OR4D1Q15615 310 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 GLT6D1Q7Z4J2 308 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 DDX53Q86TM3 631 aaKnown RBP9.3□□□□□ -0.92
UBE3B-207ENST00000537063 KBTBD2Q8IY47 623 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 PGAM4Q8N0Y7 254 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 AFAP1L2Q8N4X5 818 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 KYQ8NBH2 561 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 TOP1MTQ969P6 601 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 ASB2Q96Q27 587 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 C19orf43Q9BQ61 176 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 ZBED2Q9BTP6 218 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 CYP4F11Q9HBI6 524 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 CYP4F12Q9HCS2 524 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 NDE1Q9NXR1 346 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 GTSE1Q9NYZ3 720 aa9.3□□□□□ -0.92
UBE3B-207ENST00000537063 KLK8O60259 260 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 TMCC1O94876 653 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 FGF4P08620 206 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 PSMD8P48556 350 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 ADARP55265 1226 aaKnown RBP9.29□□□□□ -0.92
UBE3B-207ENST00000537063 TRAF2Q12933 501 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 PIGGQ5H8A4 983 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 RNF111Q6ZNA4 994 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 DEFB128Q7Z7B8 93 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 KBTBD6Q86V97 674 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 HPS6Q86YV9 775 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 RNF135Q8IUD6 432 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 DSELQ8IZU8 1212 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF558Q96NG5 402 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 BIRC8Q96P09 236 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 C1QTNF3Q9BXJ4 246 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 PPP1R12CQ9BZL4 782 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 SARDHQ9UL12 918 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 TRIM17Q9Y577 477 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 RAI2Q9Y5P3 530 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 LCHNA4D1U4 455 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 H3BNX3 289 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 KERAO60938 352 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 PDE5AO76074 875 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 PDHA1P08559 390 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 SCNN1BP51168 640 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 SESN3P58005 492 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 SQLEQ14534 574 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 VEPH1Q14D04 833 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF423Q2M1K9 1284 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 MUM1Q2TAK8 710 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 KIAA1841Q6NSI8 718 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 HJURPQ8NCD3 748 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-207ENST00000537063 OR4K2Q8NGD2 314 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 KIAA1191Q96A73 305 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 PPP1R36Q96LQ0 422 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 CRISPLD2Q9H0B8 497 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 ZNF334Q9HCZ1 680 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-207ENST00000537063 UTP6Q9NYH9 597 aaKnown RBP9.29□□□□□ -0.92
UBE3B-207ENST00000537063 LRCH1Q9Y2L9 728 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 INSL5Q9Y5Q6 135 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 CARNS1A5YM72 827 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 C2orf81A6NN90 581 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 ANKRD66B4E2M5 251 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 LILRB3O75022 631 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 SMIM24O75264 130 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 C1RP00736 705 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 PRSS56P0CW18 603 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 CCL5P13501 91 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 LPOP22079 712 aaPredicted RBP9.29□□□□□ -0.92
UBE3B-207ENST00000537063 NUDT2P50583 147 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 TLE2Q04725 743 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 TWF1Q12792 350 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 TRIM60Q495X7 471 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 ANO7Q6IWH7 933 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 RCN3Q96D15 328 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 ADGRE3Q9BY15 652 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 VPS9D1Q9Y2B5 631 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 TRAF6Q9Y4K3 522 aa9.29□□□□□ -0.92
UBE3B-207ENST00000537063 CBX4O00257 560 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 CASQ2O14958 399 aaPredicted RBP9.28□□□□□ -0.92
UBE3B-207ENST00000537063 UPP2O95045 317 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 CLCN4P51793 760 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 CLNS1AP54105 237 aaKnown RBP9.28□□□□□ -0.92
UBE3B-207ENST00000537063 EPHB1P54762 984 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 NAA20P61599 178 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 KANK2Q63ZY3 851 aa9.28□□□□□ -0.92
UBE3B-207ENST00000537063 LARP4Q71RC2 724 aaKnown RBP eCLIP9.28□□□□□ -0.92
UBE3B-207ENST00000537063 RPS27LQ71UM5 84 aaKnown RBP9.28□□□□□ -0.92
UBE3B-207ENST00000537063 DNAJB7Q7Z6W7 309 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms