RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 LRCH4O75427 683 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 RNF8O76064 485 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 TMCC1O94876 653 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 BPNT1O95861 308 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 WNT1P04628 370 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 GYPCP04921 128 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 SERPING1P05155 500 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 TPM3P06753 285 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 RAC2P15153 192 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 CD38P28907 300 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 MIPP30301 263 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 MAT2AP31153 395 aaKnown RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 DNAJA1P31689 397 aaKnown RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 DNA2P51530 1060 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 NEK3P51956 506 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 SERINC3Q13530 473 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 INAVAQ3KP66 663 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 PARP15Q460N3 678 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 SETMARQ53H47 684 aaPredicted RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 SLC45A4Q5BKX6 768 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 CARD16Q5EG05 197 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 NEK5Q6P3R8 708 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 PARS2Q7L3T8 475 aaKnown RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 GLRX5Q86SX6 157 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 PRPF39Q86UA1 669 aaKnown RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 VPS36Q86VN1 386 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 IQCHQ86VS3 1027 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 HORMAD1Q86X24 394 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 PSTKQ8IV42 348 aaKnown RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 UMODL1-AS1Q8N2C9 162 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 ARFGAP1Q8N6T3 406 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 MFSD2AQ8NA29 543 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 OR2AP1Q8NGE2 309 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 BAHD1Q8TBE0 780 aaPredicted RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 CASKIN2Q8WXE0 1202 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 HMCESQ96FZ2 354 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 NCAPGQ9BPX3 1015 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 KLC2Q9H0B6 622 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 DHX35Q9H5Z1 703 aaKnown RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 ZDHHC6Q9H6R6 413 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 GDF3Q9NR23 364 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 DONSONQ9NYP3 566 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 ARHGAP20Q9P2F6 1191 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 CAPN11Q9UMQ6 739 aa7.13□□□□□ -1.27
YBX3-206ENST00000536823 LUC7L2Q9Y383 392 aaKnown RBP7.13□□□□□ -1.27
YBX3-206ENST00000536823 A0A1W2PQU0 124 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 PRAMEF26H0Y7S4 382 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 TLR4O00206 839 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 EEF2KO00418 725 aaKnown RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 BUB1O43683 1085 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 PRPSAP2O60256 369 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ATE1O95260 518 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 TRIM16O95361 564 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 FTH1P19P0C7X4 201 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ADRB3P13945 408 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 PRLRP16471 622 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 AKT2P31751 481 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 PCK1P35558 622 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 GRK6P43250 576 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ZNF135P52742 658 aaPredicted RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 NDST2P52849 883 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 NXPH1P58417 271 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 SNRPD1P62314 119 aaKnown RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 OVGP1Q12889 678 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 TRIM14Q14142 442 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 INPP5AQ14642 412 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ACAP1Q15027 740 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 TRIP6Q15654 476 aaKnown RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 CA9Q16790 459 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ZNF284Q2VY69 593 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 INO80DQ53TQ3 878 aaPredicted RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 ZNF805Q5CZA5 627 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ATXN7L2Q5T6C5 722 aaPredicted RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 ERMARDQ5T6L9 678 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 LEKR1Q6ZMV7 388 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 RFX8Q6ZV50 586 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ZSCAN30Q86W11 494 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ZNF354CQ86Y25 554 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 OXR1Q8N573 874 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 TMEM145Q8NBT3 493 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 RNF214Q8ND24 703 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 OR6K2Q8NGY2 324 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 SETD7Q8WTS6 366 aaKnown RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 VOPP1Q96AW1 172 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 LRIG1Q96JA1 1093 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 GDAP1L1Q96MZ0 367 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ELF4Q99607 663 aaPredicted RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 CDC6Q99741 560 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.12□□□□□ -1.27
YBX3-206ENST00000536823 XPO4Q9C0E2 1151 aaKnown RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 TSPY26PQ9H489 355 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 LRRC19Q9H756 370 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 PDFQ9HBH1 243 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 MRPL47Q9HD33 250 aaKnown RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 MYO1AQ9UBC5 1043 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 HECAQ9UBI9 543 aaPredicted RBP7.12□□□□□ -1.27
YBX3-206ENST00000536823 LHX3Q9UBR4 397 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 PCSK1NQ9UHG2 260 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 NENFQ9UMX5 172 aa7.12□□□□□ -1.27
YBX3-206ENST00000536823 ZFR2Q9UPR6 939 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms