RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TENM4Q6N022 2769 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 K7ENP7 123 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 PSMD11O00231 422 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 PSTPIP1O43586 416 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 CCNB1P14635 433 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 COMTP21964 271 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 TEAD1P28347 426 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 RPL26P61254 145 aaKnown RBP12.46□□□□□ -0.41
PRKDC-207ENST00000536483 IFI35P80217 286 aaPredicted RBP12.46□□□□□ -0.41
PRKDC-207ENST00000536483 TRAF2Q12933 501 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 CLN3Q13286 438 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 SPIDRQ14159 915 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 IHHQ14623 411 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 IRF4Q15306 451 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 TCEA2Q15560 299 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 C11orf63Q6NUN7 778 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 INO80CQ6PI98 192 aaPredicted RBP12.46□□□□□ -0.41
PRKDC-207ENST00000536483 NLRP8Q86W28 1048 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 SDR16C5Q8N3Y7 309 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 WDR48Q8TAF3 677 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 ARRDC2Q8TBH0 407 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 PIH1D2Q8WWB5 315 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 COQ10AQ96MF6 247 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 LUC7LQ9NQ29 371 aaKnown RBP12.46□□□□□ -0.41
PRKDC-207ENST00000536483 HAUS2Q9NVX0 235 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 WDR70Q9NW82 654 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 RPL26L1Q9UNX3 145 aaKnown RBP12.46□□□□□ -0.41
PRKDC-207ENST00000536483 DOLKQ9UPQ8 538 aa12.46□□□□□ -0.41
PRKDC-207ENST00000536483 CCDC187A0A096LP49 1063 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 LRRD1A4D1F6 860 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 B8ZZF3 427 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 PYCARD-AS1I3L0S3 204 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 NTN3O00634 580 aaPredicted RBP12.45□□□□□ -0.42
PRKDC-207ENST00000536483 RECQL5O94762 991 aaPredicted RBP12.45□□□□□ -0.42
PRKDC-207ENST00000536483 HEXIM1O94992 359 aaKnown RBP12.45□□□□□ -0.42
PRKDC-207ENST00000536483 NDUFA10O95299 355 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 KRT10P13645 584 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 CDC25BP30305 580 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 CDKN2BP42772 138 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 NR2C2P49116 596 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 HK3P52790 923 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 PDK1Q15118 436 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 SPA17Q15506 151 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 SLC14A2Q15849 920 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 ARMC12Q5T9G4 340 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 CCDC81Q6ZN84 652 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 NYAP1Q6ZVC0 841 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 B3GNT8Q7Z7M8 397 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 CLEC14AQ86T13 490 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 HID1Q8IV36 788 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 CCDC13Q8IYE1 715 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 KATNAL2Q8IYT4 538 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 TSACCQ96A04 125 aaPredicted RBP12.45□□□□□ -0.42
PRKDC-207ENST00000536483 TADA1Q96BN2 335 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 LYSMD1Q96S90 227 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 SEMA3CQ99985 751 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 APOOQ9BUR5 198 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 NT5MQ9NPB1 228 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 RBM22Q9NW64 420 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRKDC-207ENST00000536483 SIRPGQ9P1W8 387 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 IMPACTQ9P2X3 320 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 B4GALT6Q9UBX8 382 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 COQ6Q9Y2Z9 468 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 DGKBQ9Y6T7 804 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 PIEZO2Q9H5I5 2752 aa12.45□□□□□ -0.42
PRKDC-207ENST00000536483 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 TNFRSF10CO14798 259 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 PJA2O43164 708 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 CPP00450 1065 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 PRLP01236 227 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 ITGA2BP08514 1039 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 ELFN1P0C7U0 828 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 CYP2A6P11509 494 aaPredicted RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 CTSEP14091 401 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 VIPR1P32241 457 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 GJC1P36383 396 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 MLLT3P42568 568 aaPredicted RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 BLKP51451 505 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 KIAA1024LP59773 190 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 MAXP61244 160 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 DPTQ07507 201 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 INPP5AQ14642 412 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 NFATC4Q14934 902 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 ELOCQ15369 112 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 CNGA3Q16281 694 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 ALG11Q2TAA5 492 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 LVRNQ6Q4G3 990 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 ENPP7Q6UWV6 458 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 MFSD7Q6UXD7 560 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 BZW1Q7L1Q6 419 aaKnown RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 RD3Q7Z3Z2 195 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 TECPR1Q7Z6L1 1165 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 TMEM139Q8IV31 216 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 FSTL5Q8N475 847 aaPredicted RBP12.44□□□□□ -0.42
PRKDC-207ENST00000536483 FBXO39Q8N4B4 442 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 CNTD1Q8N815 330 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 ARL10Q8N8L6 244 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 KYQ8NBH2 561 aa12.44□□□□□ -0.42
PRKDC-207ENST00000536483 ATL2Q8NHH9 583 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms