RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SIGIRRQ6IA17 410 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 TSPYL6Q8N831 410 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 LMNTD1Q8N9Z9 388 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 RRP36Q96EU6 259 aaKnown RBP5.06□□□□□ -1.6
PRKDC-205ENST00000535375 CDCA5Q96FF9 252 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 PDCL3Q9H2J4 239 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 RANBP17Q9H2T7 1088 aaKnown RBP5.06□□□□□ -1.6
PRKDC-205ENST00000535375 BRF2Q9HAW0 419 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 SLC6A13Q9NSD5 602 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 AMDHD2Q9Y303 409 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 LOXL2Q9Y4K0 774 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 PSAT1Q9Y617 370 aa5.06□□□□□ -1.6
PRKDC-205ENST00000535375 CGNL1Q0VF96 1302 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 A0A0B4J293 547 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 IFNL4K9M1U5 179 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 TNFSF14O43557 240 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 LMX1BO60663 402 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 ATP1A1P05023 1023 aaKnown RBP5.05□□□□□ -1.6
PRKDC-205ENST00000535375 HNRNPH2P55795 449 aaKnown RBP5.05□□□□□ -1.6
PRKDC-205ENST00000535375 FGFBP1Q14512 234 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 ACCSLQ4AC99 568 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 KCNT1Q5JUK3 1230 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 C6orf141Q5SZD1 244 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 GPATCH4Q5T3I0 446 aaKnown RBP5.05□□□□□ -1.6
PRKDC-205ENST00000535375 PLEKHA7Q6IQ23 1121 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 ACAD10Q6JQN1 1059 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 QSOX2Q6ZRP7 698 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 FOXRED2Q8IWF2 684 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 CHERPQ8IWX8 916 aaKnown RBP5.05□□□□□ -1.6
PRKDC-205ENST00000535375 GTF3C6Q969F1 213 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 ZUFSPQ96AP4 578 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 HARBI1Q96MB7 349 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 NODALQ96S42 347 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 POLR3GLQ9BT43 218 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 LRRC4Q9HBW1 653 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 ASAH2Q9NR71 780 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 TAS2R10Q9NYW0 307 aa5.05□□□□□ -1.6
PRKDC-205ENST00000535375 PDS5AQ29RF7 1337 aaKnown RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 A0A1W2PQM1 296 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 A6NLC8 198 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 ZNF587BE7ETH6 402 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 CETPP11597 493 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 KRT10P13645 584 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 HARS2P49590 506 aaKnown RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 RARSP54136 660 aaKnown RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 SLC20A2Q08357 652 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 ARL16Q0P5N6 197 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 ILF3Q12906 894 aaKnown RBP eCLIP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 DCTN2Q13561 401 aaKnown RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 DUS1LQ6P1R4 473 aaKnown RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 FOXL2NBQ6ZUU3 175 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 ZNF329Q86UD4 541 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 SATL1Q86VE3 508 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 ODF3L1Q8IXM7 274 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 RNF113BQ8IZP6 322 aaKnown RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 MUC20Q8N307 709 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 SPATA22Q8NHS9 363 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 LNX1Q8TBB1 728 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 NR4A3Q92570 626 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 TTC14Q96N46 770 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 MTERF1Q99551 399 aaKnown RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 CMKLR1Q99788 373 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 EIF2AK1Q9BQI3 630 aaKnown RBP5.04□□□□□ -1.6
PRKDC-205ENST00000535375 TMEM47Q9BQJ4 181 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 KCNN2Q9H2S1 579 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 KIF9Q9HAQ2 790 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 PREBQ9HCU5 417 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 UBN1Q9NPG3 1134 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 PCDHB16Q9NRJ7 776 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 PADI1Q9ULC6 663 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 NAALADL1Q9UQQ1 740 aa5.04□□□□□ -1.6
PRKDC-205ENST00000535375 CRYAAP02489 173 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 USP8P40818 1118 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 BRWD1-AS2P59051 145 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 CSNK2A1P68400 391 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-205ENST00000535375 FOXM1Q08050 763 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 STPG1Q5TH74 334 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 HIST2H2BCQ6DN03 193 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 HIST2H2BDQ6DRA6 164 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 TRNP1Q6NT89 227 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 CDC73Q6P1J9 531 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 INO80CQ6PI98 192 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-205ENST00000535375 TSSK4Q6SA08 328 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 ATF7IPQ6VMQ6 1270 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 ZNF771Q7L3S4 317 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-205ENST00000535375 CCDC13Q8IYE1 715 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 CSNK2A3Q8NEV1 391 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 OR13A1Q8NGR1 328 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 SMARCE1Q969G3 411 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 HES6Q96HZ4 224 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 JMJD4Q9H9V9 463 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 MMP25Q9NPA2 562 aa5.03□□□□□ -1.6
PRKDC-205ENST00000535375 NOTCH4Q99466 2003 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 XPNPEP2O43895 674 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 EGFP01133 1207 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 UMODP07911 640 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 UBL4AP11441 157 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 CDH1P12830 882 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 S1PR1P21453 382 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms