RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 C9orf64Q5T6V5 341 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 ART4Q93070 314 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 DNAJC19Q96DA6 116 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 NECTIN3Q9NQS3 549 aa18.17■□□□□ 0.5
SFSWAP-203ENST00000535236 MSI1O43347 362 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 IDSP22304 550 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 CORO1AP31146 461 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 DGKZQ13574 1117 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 AUHQ13825 339 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 ABRAXAS1Q6UWZ7 409 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 FBXO22Q8NEZ5 403 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 GLOD4Q9HC38 313 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 SLC35C2Q9NQQ7 365 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 GRIK5Q16478 980 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 PARP15Q460N3 678 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 TTC27Q6P3X3 843 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 VSTM1Q6UX27 236 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 ISLR2Q6UXK2 745 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 CHST9Q7L1S5 443 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 TCAIMQ8N3R3 496 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 CERS5Q8N5B7 392 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 AMER2Q8N7J2 671 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 TRPV3Q8NET8 790 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 POP5Q969H6 163 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 RHOBTB2Q9BYZ6 727 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 PXDNQ92626 1479 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 NPEPPSL1A6NEC2 478 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 RNASEH2AO75792 299 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 ATAT1Q5SQI0 421 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 IRGCQ6NXR0 463 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 TNS4Q8IZW8 715 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 C5orf34Q96MH7 638 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 AGO3Q9H9G7 860 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 KCTD5Q9NXV2 234 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 PSMD13Q9UNM6 376 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 PCDHAC2Q9Y5I4 1007 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 BTNL10A8MVZ5 291 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 CHRNGP07510 517 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 ITPKAP23677 461 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 ACTR3P61158 418 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 CYP4F2P78329 520 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 CYP4F3Q08477 520 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 CAMK1Q14012 370 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 CPTPQ5TA50 214 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 LRRC55Q6ZSA7 311 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 SAPCD2Q86UD0 394 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 METTL21AQ8WXB1 218 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 AP2M1Q96CW1 435 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 P2RY11Q96G91 374 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 GMIPQ9P107 970 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 PHF11Q9UIL8 331 aa18.16■□□□□ 0.5
SFSWAP-203ENST00000535236 TMEM88BA6NKF7 163 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 MTRF1O75570 445 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 GIMD1P0DJR0 217 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 TTKP33981 857 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 WASP42768 502 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 KBTBD8Q8NFY9 601 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 ADAMTS15Q8TE58 950 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 COQ7Q99807 217 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 MAGEB3O15480 346 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 TNFRSF21O75509 655 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 OAFQ86UD1 273 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 SLC47A1Q96FL8 570 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 H3BM21 787 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 LIN7AO14910 233 aaPredicted RBP18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 RPP40O75818 363 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 UGT2B4P06133 528 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 EPHX1P07099 455 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 SLC24A5Q71RS6 500 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 NETO2Q8NC67 525 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 BRINP2Q9C0B6 783 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 KCNN2Q9H2S1 579 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 PTPRJQ12913 1337 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 ATP6AP2A0A1C7CYW4 349 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 SLC22A3O75751 556 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 ATP6AP2O75787 350 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 OR5F1O95221 314 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 ITGB5P18084 799 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 UBAP2LQ14157 1087 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 KBTBD2Q8IY47 623 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 PEX5LQ8IYB4 626 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 PCDH18Q9HCL0 1135 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 FAM92AA1XBS5 289 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 SNAP91O60641 907 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 C1RP00736 705 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 C10orf107Q8IVU9 208 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 MFSD14AQ96MC6 490 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 PACSIN3Q9UKS6 424 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 C15orf41Q9Y2V0 281 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 PCDHB1Q9Y5F3 818 aa18.15■□□□□ 0.5
SFSWAP-203ENST00000535236 EPHA3P29320 983 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 MBTD1Q05BQ5 628 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 PYDC2Q56P42 97 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 STRADAQ7RTN6 431 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 ANKRD23Q86SG2 305 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 TMPRSS11BQ86T26 416 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 TRBC1P01850 177 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 PTPN9P43378 593 aa18.14■□□□□ 0.49
SFSWAP-203ENST00000535236 MARCKSL1P49006 195 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms