RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 KCNE4Q8WWG9 221 aa18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 CTNNBL1Q8WYA6 563 aaPredicted RBP18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 CCDC97Q96F63 343 aaPredicted RBP18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 SEMA3CQ99985 751 aa18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 XPO4Q9C0E2 1151 aaKnown RBP18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 HAUS2Q9NVX0 235 aa18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 TRNAU1APQ9NX07 287 aaKnown RBP18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 CTTNBP2NLQ9P2B4 639 aa18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 SLC17A4Q9Y2C5 497 aa18.81■□□□□ 0.6
NDUFS3-213ENST00000534716 PTPRQQ9UMZ3 2332 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 ANKRD36A6QL64 1941 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 SSU72P8A0A1W2PR75 194 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 NUDT21O43809 227 aaKnown RBP18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 FUCA1P04066 466 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 RPLP0P05388 317 aaKnown RBP18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 ITGA2BP08514 1039 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 PDHA1P08559 390 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 CCNB1P14635 433 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 ZNF30P17039 623 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 TMPRSS3P57727 454 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 CDK3Q00526 305 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 TRIM14Q14142 442 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 IHHQ14623 411 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 SPECC1LQ69YQ0 1117 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 TSPAN33Q86UF1 283 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 NRROSQ86YC3 692 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 CPNE8Q86YQ8 564 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 CCNJLQ8IV13 435 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 OR8K1Q8NGG5 319 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 CCL4L1Q8NHW4 92 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 KIAA1524Q8TCG1 905 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 SCARF2Q96GP6 870 aaPredicted RBP18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 TMEM74Q96NL1 305 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 DNPEPQ9ULA0 475 aa18.8■□□□□ 0.6
NDUFS3-213ENST00000534716 A0A0J9YYE9 177 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 PMS2P1A4D2B8 440 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 ZNF487B1APH4 448 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 TRBC1P01850 177 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 INHBCP55103 352 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 TAS2R40P59535 323 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 PTSQ03393 145 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 ZFP36L1Q07352 338 aaKnown RBP18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 PTPRRQ15256 657 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 DENND2CQ68D51 928 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 ADAMTSL4Q6UY14 1074 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 ZNF765Q7L2R6 523 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 B3GNT8Q7Z7M8 397 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 PQLC3Q8N755 202 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 ARRDC2Q8TBH0 407 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 NAF1Q96HR8 494 aaKnown RBP18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 PACSIN1Q9BY11 444 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 STRADBQ9C0K7 418 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 DPEP2Q9H4A9 486 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 CARS2Q9HA77 564 aaKnown RBP18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 LRIT1Q9P2V4 623 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 PCDHGA7Q9Y5G6 932 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 RNF215Q9Y6U7 377 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 ATMQ13315 3056 aa18.79■□□□□ 0.6
NDUFS3-213ENST00000534716 RP1P56715 2156 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 EIF4E1BA6NMX2 242 aaKnown RBP18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 B4DGG1 531 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 PLD2O14939 933 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 TNFSF15O95150 251 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 SOD1P00441 154 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 FGF1P05230 155 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 PYGLP06737 847 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 IVLP07476 585 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 TMEM253P0C7T8 217 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 MX2P20592 715 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 RPL26P61254 145 aaKnown RBP18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 CXADRP78310 365 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 ITKQ08881 620 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 ILF3Q12906 894 aaKnown RBP eCLIP18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 PEX6Q13608 980 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 NR1D2Q14995 579 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 RAET1GQ6H3X3 334 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 ZNF438Q7Z4V0 828 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 SPRED1Q7Z699 444 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 VSIG1Q86XK7 387 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 SFTPA2Q8IWL1 248 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 TMEM159Q96B96 161 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 HDAC11Q96DB2 347 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 LYSMD1Q96S90 227 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 TDRD1Q9BXT4 1180 aaKnown RBP18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 GSDMCQ9BYG8 508 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 ABCG8Q9H221 673 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 SYNDIG1Q9H7V2 258 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 SPATS2LQ9NUQ6 558 aaKnown RBP18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 RBM22Q9NW64 420 aaKnown RBP eCLIP18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 ACSL6Q9UKU0 697 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 SUFUQ9UMX1 484 aa18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 RPL26L1Q9UNX3 145 aaKnown RBP18.78■□□□□ 0.6
NDUFS3-213ENST00000534716 CFAP46Q8IYW2 2715 aa18.77■□□□□ 0.6
NDUFS3-213ENST00000534716 CAPN8A6NHC0 703 aa18.77■□□□□ 0.6
NDUFS3-213ENST00000534716 KLK10O43240 276 aa18.77■□□□□ 0.6
NDUFS3-213ENST00000534716 CBFA2T2O43439 604 aa18.77■□□□□ 0.6
NDUFS3-213ENST00000534716 ZIC2O95409 532 aaPredicted RBP18.77■□□□□ 0.6
NDUFS3-213ENST00000534716 PRLP01236 227 aa18.77■□□□□ 0.6
NDUFS3-213ENST00000534716 CTPS1P17812 591 aa18.77■□□□□ 0.6
NDUFS3-213ENST00000534716 CA4P22748 312 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms