RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442		Q96MF0	132 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	EIF3C	Q99613	913 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	AIFM2	Q9BRQ8	373 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ALG8	Q9BVK2	526 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	AGXT2	Q9BYV1	514 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GPR63	Q9BZJ6	419 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RMI1	Q9H9A7	625 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SAP30L	Q9HAJ7	183 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PLEKHA2	Q9HB19	425 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NOD2	Q9HC29	1040 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SMPD4	Q9NXE4	827 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	EHD3	Q9NZN3	535 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TES	Q9UGI8	421 aa	Known RBP	4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RAB21	Q9UL25	225 aa		4.8	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NAV1	Q8NEY1	1877 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	VWA3A	A6NCI4	1184 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442		B4E171	279 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	AP4M1	O00189	453 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MPHOSPH10	O00566	681 aa	Known RBP	4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ATP2A1	O14983	1001 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NKX2-8	O15522	239 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ECI2	O75521	394 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PDE8B	O95263	885 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ONECUT2	O95948	504 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PEX11B	O96011	259 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SERPINF2	P08697	491 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	IFIT1	P09914	478 aa	Known RBP	4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CD1E	P15812	388 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CREB1	P16220	341 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ZFX	P17010	805 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ADRA1D	P25100	572 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CD52	P31358	61 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FOLR3	P41439	243 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TSPAN7	P41732	249 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FOXL2	P58012	376 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NTHL1	P78549	312 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DGCR2	P98153	550 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PSG6	Q00889	435 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DNASE1L3	Q13609	305 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ANKRD1	Q15327	319 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FAM187B	Q17R55	369 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DUOXA1	Q1HG43	343 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SLC9C2	Q5TAH2	1124 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ABHD17B	Q5VST6	288 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ANKRD40	Q6AI12	368 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RNF207	Q6ZRF8	634 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RINL	Q6ZS11	566 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442		Q6ZWC4	215 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442		Q71RC1	249 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CHST3	Q7LGC8	479 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	P3H2	Q8IVL5	708 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SLC2A12	Q8TD20	617 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SCFD2	Q8WU76	684 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	DVL3	Q92997	716 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	VPS50	Q96JG6	964 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PBK	Q96KB5	322 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SLF1	Q9BQI6	1058 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MLST8	Q9BVC4	326 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HERC2P3	Q9BVR0	1158 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TMEM245	Q9H330	911 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SERHL2	Q9H4I8	314 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SMC4	Q9NTJ3	1288 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ANAPC2	Q9UJX6	822 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PCDHB2	Q9Y5E7	798 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PCDHA10	Q9Y5I2	948 aa		4.79	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LCT	P09848	1927 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HELZ	P42694	1942 aa	Known RBP	4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	AGAP5	A6NIR3	686 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	RNF212B	A8MTL3	300 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CHL1	O00533	1208 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MPPED1	O15442	326 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PEX1	O43933	1283 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TJP3	O95049	919 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MBP	P02686	304 aa	Predicted RBP	4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CYP3A4	P08684	503 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KRT7	P08729	469 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	NR2F6	P10588	404 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CAPN3	P20807	821 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MMP8	P22894	467 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KRT9	P35527	623 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	METAP2	P50579	478 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PDE1A	P54750	535 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	KRT83	P78385	493 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	BMPR2	Q13873	1038 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CTXN3	Q4LDR2	81 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ATG16L1	Q676U5	607 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	ACSM6	Q6P461	480 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	SYNE3	Q6ZMZ3	975 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	PTCHD4	Q6ZW05	846 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	MRGPRE	Q86SM8	312 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FAM114A1	Q8IWE2	563 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TSPYL6	Q8N831	410 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	FAM71D	Q8N9W8	422 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	LINS1	Q8NG48	757 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	CEP76	Q8TAP6	659 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	TFAP2B	Q92481	460 aa		4.78	□□□□□ -1.64
ECHDC1-223	ENST00000534442	HAS1	Q92839	578 aa		4.78	□□□□□ -1.64

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