RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PDCD6IPQ8WUM4 868 aaKnown RBP11.32□□□□□ -0.6
CLCF1-202ENST00000533438 CCDC74AQ96AQ1 378 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 NUS1Q96E22 293 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 SLC46A1Q96NT5 459 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 MCCC1Q96RQ3 725 aaPredicted RBP11.32□□□□□ -0.6
CLCF1-202ENST00000533438 TMEM168Q9H0V1 697 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 MRPL40Q9NQ50 206 aaKnown RBP11.32□□□□□ -0.6
CLCF1-202ENST00000533438 KCTD5Q9NXV2 234 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 GULP1Q9UBP9 304 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 GPR34Q9UPC5 381 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 PCDHGA8Q9Y5G5 932 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 ZFC3H1O60293 1989 aaKnown RBP11.31□□□□□ -0.6
CLCF1-202ENST00000533438 A0A1W2PQM1 296 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PRSS38A1L453 326 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 NPIPB15A6NHN6 443 aaPredicted RBP11.31□□□□□ -0.6
CLCF1-202ENST00000533438 CDRT15L2A8MXV6 281 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PSMD11O00231 422 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PJA2O43164 708 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 ZSCAN12O43309 604 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 MFSD11O43934 449 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 FZD6O60353 706 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 NOBOXO60393 691 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PGLSO95336 258 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PRB1P04280 392 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 TMEM253P0C7T8 217 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 MYCLP1P12525 358 aaPredicted RBP11.31□□□□□ -0.6
CLCF1-202ENST00000533438 GARSP41250 739 aaKnown RBP11.31□□□□□ -0.6
CLCF1-202ENST00000533438 GALNT2Q10471 571 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 SPIDRQ14159 915 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 DPYSL3Q14195 570 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 KRT81Q14533 505 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PTPRRQ15256 657 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 HADHQ16836 314 aaKnown RBP11.31□□□□□ -0.6
CLCF1-202ENST00000533438 ALG1LQ6GMV1 187 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 HSD11B1LQ7Z5J1 315 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 CPNE8Q86YQ8 564 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PAF1Q8N7H5 531 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 NSMCE1Q8WV22 266 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 SNRNP27Q8WVK2 155 aaKnown RBP11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PIH1D2Q8WWB5 315 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 DTD2Q96FN9 168 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 SCRN2Q96FV2 425 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 LIN37Q96GY3 246 aaPredicted RBP11.31□□□□□ -0.6
CLCF1-202ENST00000533438 FCRL3Q96P31 734 aaPredicted RBP11.31□□□□□ -0.6
CLCF1-202ENST00000533438 LGMNQ99538 433 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 PACSIN1Q9BY11 444 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 TEX101Q9BY14 249 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 WDR26Q9H7D7 661 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 THSD1Q9NS62 852 aa11.31□□□□□ -0.6
CLCF1-202ENST00000533438 UNC13CQ8NB66 2214 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 CCDC187A0A096LP49 1063 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 PMS2P1A4D2B8 440 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 BTNL10A8MVZ5 291 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 D6RAR5 112 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 PROSCO94903 275 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 ZIC2O95409 532 aaPredicted RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 FUCA1P04066 466 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 PDHA1P08559 390 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 CYP2A6P11509 494 aaPredicted RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 PNLIPP16233 465 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 NFKBIAP25963 317 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 TEAD1P28347 426 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 ETV3P41162 512 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 MLLT3P42568 568 aaPredicted RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 CCL7P80098 99 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 IHHQ14623 411 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 TCEAL1Q15170 157 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 ANKRD20A8PQ5CZ79 823 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 ARMC12Q5T9G4 340 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 GPR155Q7Z3F1 870 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 TECPR1Q7Z6L1 1165 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 TAF8Q7Z7C8 310 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 ZNF605Q86T29 641 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 TSPAN33Q86UF1 283 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 HEATR4Q86WZ0 1026 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 SFTPA2Q8IWL1 248 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 REXO1L1PQ8IX06 675 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 CCL4L1Q8NHW4 92 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 WDR36Q8NI36 951 aaKnown RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 GPBAR1Q8TDU6 330 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 CTNNBL1Q8WYA6 563 aaPredicted RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 MAML1Q92585 1016 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 FATE1Q969F0 183 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 FAF2Q96CS3 445 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 NAF1Q96HR8 494 aaKnown RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 GFM1Q96RP9 751 aaKnown RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 ZNF670Q9BS34 389 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 FRMD8Q9BZ67 464 aaPredicted RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 TSGA10Q9BZW7 698 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 POLR1EQ9GZS1 481 aaKnown RBP11.3□□□□□ -0.6
CLCF1-202ENST00000533438 CYP4F12Q9HCS2 524 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 NT5MQ9NPB1 228 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 UVRAGQ9P2Y5 699 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 APPL1Q9UKG1 709 aa11.3□□□□□ -0.6
CLCF1-202ENST00000533438 A0A0A6YYK5 440 aaPredicted RBP11.29□□□□□ -0.6
CLCF1-202ENST00000533438 GOLGA6L9A6NEM1 432 aa11.29□□□□□ -0.6
CLCF1-202ENST00000533438 PDE2AO00408 941 aaPredicted RBP11.29□□□□□ -0.6
CLCF1-202ENST00000533438 MATN3O15232 486 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms