RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 LRRC66Q68CR7 880 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 ZCCHC8Q6NZY4 707 aaKnown RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 Q6ZVL8 140 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 TMC3Q7Z5M5 1100 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 TSPAN33Q86UF1 283 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 TMPRSS12Q86WS5 348 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 CCDC50Q8IVM0 306 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 PHACTR4Q8IZ21 702 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 UBL4BQ8N7F7 174 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 OR56A4Q8NGH8 313 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 LRRN4Q8WUT4 740 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 GATA6Q92908 595 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 HERPUD2Q9BSE4 406 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 ABCG8Q9H221 673 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 EVA1BQ9NVM1 165 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 APOBEC3BQ9UH17 382 aaKnown RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 SLC17A4Q9Y2C5 497 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 MYLKQ15746 1914 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 ZFC3H1O60293 1989 aaKnown RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 LY6G6EA0A0G2JKS1 128 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 A0A0U1RQJ8 604 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 EME2A4GXA9 379 aaPredicted RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 TMEM8BA6NDV4 472 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 SDC3O75056 442 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 NDST3O95803 873 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 SOD1P00441 154 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 TNFP01375 233 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 ALPIP09923 528 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 ETV3P41162 512 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 SPINT3P49223 89 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 EPHB1P54762 984 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 DCDC1P59894 354 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 SRP54P61011 504 aaKnown RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 CCZ1BP86790 482 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 CCZ1P86791 482 aaPredicted RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 CDK3Q00526 305 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 OTUD4Q01804 1114 aaKnown RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 SEMG2Q02383 582 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 MPP3Q13368 585 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 ELOCQ15369 112 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 ALG11Q2TAA5 492 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 HS1BP3Q53T59 392 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 C6orf132Q5T0Z8 1188 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 PDPK2PQ6A1A2 396 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 OGFOD3Q6PK18 319 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 KDELC1Q6UW63 502 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 ENPP7Q6UWV6 458 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 ADAMTSL4Q6UY14 1074 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 CCNI2Q6ZMN8 369 aaPredicted RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 ZNF567Q8N184 647 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 PELI3Q8N2H9 469 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 CHCHD4Q8N4Q1 142 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 PAF1Q8N7H5 531 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 KDF1Q8NAX2 398 aaPredicted RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 ACTL9Q8TC94 416 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 HAUS1Q96CS2 278 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 COX14Q96I36 57 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 APOLD1Q96LR9 279 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 AGAP3Q96P47 875 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 PPP1R2P1Q96PQ5 205 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 WDR24Q96S15 920 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 FERMT1Q9BQL6 677 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 DESI2Q9BSY9 194 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 LRRC61Q9BV99 259 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 FRMD8Q9BZ67 464 aaPredicted RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 SLC13A1Q9BZW2 595 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 CLPBQ9H078 707 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 TRABDQ9H4I3 376 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 WDR26Q9H7D7 661 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 PHPT1Q9NRX4 125 aaPredicted RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 RAD18Q9NS91 495 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 TRNAU1APQ9NX07 287 aaKnown RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 DKK4Q9UBT3 224 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 TRIM10Q9UDY6 481 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 FAM153AQ9UHL3 310 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 CAPN6Q9Y6Q1 641 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 U3KQA8 63 aa9.82□□□□□ -0.84
NUP98-220ENST00000533346 ZNF106Q9H2Y7 1883 aaKnown RBP9.82□□□□□ -0.84
NUP98-220ENST00000533346 MACROD2A1Z1Q3 448 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 C5orf60A6NFR6 353 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 TMEM202A6NGA9 273 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 A8MX80 341 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 YY2O15391 372 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 HYAL3O43820 417 aaPredicted RBP9.81□□□□□ -0.84
NUP98-220ENST00000533346 GCATO75600 419 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 CLDN7O95471 211 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 TOP3BO95985 862 aaKnown RBP9.81□□□□□ -0.84
NUP98-220ENST00000533346 MT-CYBP00156 380 aaPredicted RBP9.81□□□□□ -0.84
NUP98-220ENST00000533346 PCCBP05166 539 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 CEACAM5P06731 702 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 IVLP07476 585 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 CCDC175P0C221 793 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 RBP3P10745 1247 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 CTPS1P17812 591 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 RBL1P28749 1068 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 HMGCLP35914 325 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 CAMK2BQ13554 666 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 ZNF542PQ5EBM4 170 aa9.81□□□□□ -0.84
NUP98-220ENST00000533346 HENMT1Q5T8I9 393 aaKnown RBP9.81□□□□□ -0.84
NUP98-220ENST00000533346 FAXCQ5TGI0 409 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms