RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SHBQ15464 509 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 RSPO4Q2I0M5 234 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 PNCKQ6P2M8 343 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 ZNF765Q7L2R6 523 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 TMC3Q7Z5M5 1100 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 CREG2Q8IUH2 290 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 RAVER1Q8IY67 606 aaKnown RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 NRSN1Q8IZ57 195 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 TTC30BQ8N4P2 665 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 CCDC89Q8N998 374 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 SCAMP4Q969E2 229 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 MAGOHBQ96A72 148 aaKnown RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 SRPK1Q96SB4 655 aaKnown RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 ELF4Q99607 663 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 TBL1YQ9BQ87 522 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 APOOQ9BUR5 198 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 ZFYVE1Q9HBF4 777 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 ETNK1Q9HBU6 452 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 PAK5Q9P286 719 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 CD84Q9UIB8 345 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 OR1A2Q9Y585 309 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 SAR1BQ9Y6B6 198 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 A0A1B0GTQ1 180 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 TM4SF5O14894 197 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 DFNA5O60443 496 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 AP2A1O95782 977 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 SOD1P00441 154 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 CD59P13987 128 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 ACTN2P35609 894 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 FDFT1P37268 417 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 RXRGP48443 463 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 CCT8P50990 548 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 DPTQ07507 201 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 EIF2B5Q13144 721 aaKnown RBP11.96□□□□□ -0.49
SSBP3-214ENST00000533209 MSLNQ13421 630 aaPredicted RBP11.96□□□□□ -0.49
SSBP3-214ENST00000533209 SEMA5AQ13591 1074 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 KCTD19Q17RG1 926 aaPredicted RBP11.96□□□□□ -0.49
SSBP3-214ENST00000533209 UAP1L1Q3KQV9 507 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 NYAP1Q6ZVC0 841 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 GSTA5Q7RTV2 222 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 NLRP8Q86W28 1048 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 OXR1Q8N573 874 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 PDCD7Q8N8D1 485 aaKnown RBP11.96□□□□□ -0.49
SSBP3-214ENST00000533209 ATL2Q8NHH9 583 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 CCHCR1Q8TD31 782 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 FUBP1Q96AE4 644 aaKnown RBP11.96□□□□□ -0.49
SSBP3-214ENST00000533209 CAPZA3Q96KX2 299 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 RIOK2Q9BVS4 552 aaKnown RBP11.96□□□□□ -0.49
SSBP3-214ENST00000533209 GPR63Q9BZJ6 419 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 TRABDQ9H4I3 376 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 CAAP1Q9H8G2 361 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 LRRC40Q9H9A6 602 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 ARNT2Q9HBZ2 717 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 TM7SF3Q9NS93 570 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 PKD2L2Q9NZM6 624 aa11.96□□□□□ -0.49
SSBP3-214ENST00000533209 CDV3Q9UKY7 258 aaKnown RBP11.96□□□□□ -0.49
SSBP3-214ENST00000533209 PNMA8BQ9ULN7 279 aaPredicted RBP11.96□□□□□ -0.49
SSBP3-214ENST00000533209 LRRK1Q38SD2 2015 aa11.96□□□□□ -0.5
SSBP3-214ENST00000533209 ADAMTS9Q9P2N4 1935 aa11.96□□□□□ -0.5
SSBP3-214ENST00000533209 RGSL1A5PLK6 1076 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 GOLGA6CA6NDK9 693 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 GOLGA6BA6NDN3 693 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 ERI2A8K979 691 aaKnown RBP11.95□□□□□ -0.5
SSBP3-214ENST00000533209 PDE2AO00408 941 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-214ENST00000533209 PSMD3O43242 534 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 PCDHGA12O60330 932 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 PHF2O75151 1096 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 SLC4A1P02730 911 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 HOXC4P09017 264 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-214ENST00000533209 GOLGA6DP0CG33 693 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 TSHRP16473 764 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 TEAD1P28347 426 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 HMGCLP35914 325 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 FNTAP49354 379 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 ARRB1P49407 418 aaPredicted RBP11.95□□□□□ -0.5
SSBP3-214ENST00000533209 THOP1P52888 689 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 IL9RQ01113 521 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 SLC14A1Q13336 389 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 PTK2BQ14289 1009 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 NFATC4Q14934 902 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 ZNF542PQ5EBM4 170 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 CCDC137Q6PK04 289 aaKnown RBP11.95□□□□□ -0.5
SSBP3-214ENST00000533209 C4orf22Q6V702 233 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 SYT10Q6XYQ8 523 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 MACC1Q6ZN28 852 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 DBX2Q6ZNG2 339 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 PARGQ86W56 976 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 GPR26Q8NDV2 337 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 BLOC1S5Q8TDH9 187 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 AP2M1Q96CW1 435 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 AGAP2Q99490 1192 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 LGR4Q9BXB1 951 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 TEX101Q9BY14 249 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 WDR26Q9H7D7 661 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 GOLGA6AQ9NYA3 693 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 DLL3Q9NYJ7 618 aa11.95□□□□□ -0.5
SSBP3-214ENST00000533209 HACD3Q9P035 362 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms