RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MCUQ8NE86 351 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 RUBCNQ92622 972 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 AP2M1Q96CW1 435 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 EID2BQ96D98 161 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 KLHDC7BQ96G42 594 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 ERP44Q9BS26 406 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 TRIM51Q9BSJ1 452 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 TRIM31Q9BZY9 425 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 CDH19Q9H159 772 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 ABCG8Q9H221 673 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 FAM83DQ9H4H8 585 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 MBNL1Q9NR56 388 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 PIH1D1Q9NWS0 290 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 BFARQ9NZS9 450 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 CD84Q9UIB8 345 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 SLC6A14Q9UN76 642 aa11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 UTP11Q9Y3A2 253 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-211ENST00000533012 A6NNZ2 444 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 SMAPO00193 183 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 TLR4O00206 839 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 TOR1BO14657 336 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 VILLO15195 856 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 CTIFO43310 598 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 PPFIA2O75334 1257 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 CFIP05156 583 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 PCCBP05166 539 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 PYGLP06737 847 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZNF806P0C7X5 589 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 MLNP12872 115 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 ADRA1DP25100 572 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 IVDP26440 423 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 GPR1P46091 355 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 RABIFP47224 123 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 CSNK1EP49674 416 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 SESN2P58004 480 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 YPEL5P62699 121 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 DPTQ07507 201 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 INPP5AQ14642 412 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 POU6F1Q14863 301 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 MORF4L2Q15014 288 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 IRF4Q15306 451 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 CCDC6Q16204 474 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 TRIM61Q5EBN2 209 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 PLA2G2CQ5R387 149 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 CERCAMQ5T4B2 595 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 RNASEH2BQ5TBB1 312 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 ANKRD22Q5VYY1 191 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 IZUMO3Q5VZ72 239 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 ESRP1Q6NXG1 681 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 C8orf74Q6P047 294 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 PNCKQ6P2M8 343 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 SLC23A3Q6PIS1 610 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 Q6ZSR6 202 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 ABI3BPQ7Z7G0 1075 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 IQCHQ86VS3 1027 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 HOOK3Q86VS8 718 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 DCP2Q8IU60 420 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 MMGT1Q8N4V1 131 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 NAT8LQ8N9F0 302 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 SNF8Q96H20 258 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 PHOX2BQ99453 314 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 HINFPQ9BQA5 517 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 RIOK2Q9BVS4 552 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 CARD6Q9BX69 1037 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 NUSAP1Q9BXS6 441 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 RAB17Q9H0T7 212 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 XAB2Q9HCS7 855 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 BPIFA1Q9NP55 256 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 IL17CQ9P0M4 197 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 ANAPC5Q9UJX4 755 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 CA5BQ9Y2D0 317 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 SNX24Q9Y343 169 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 ARL5AQ9Y689 179 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 SLCO1B1Q9Y6L6 691 aa11.21□□□□□ -0.61
TRAPPC4-211ENST00000533012 A0A1W2PR77 199 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 MAGEB16A2A368 324 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 HEATR9A2RTY3 570 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 POM121BA6NF01 834 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 H0Y8X5 98 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 GOLGA8MH3BSY2 632 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 LDB2O43679 373 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 BUD23O43709 281 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 LRP3O75074 770 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 SYPP08247 313 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 THEGLP0DJG4 465 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 TSHRP16473 764 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 BPIP17213 487 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 IGFALSP35858 605 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 HADHAP40939 763 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 PFN3P60673 137 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 IRX4P78413 519 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 SPEM2Q0P670 501 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 CALCOCO2Q13137 446 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 MTM1Q13496 603 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 SEPT6Q14141 434 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 PTK2BQ14289 1009 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 SKIDA1Q1XH10 827 aa11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 GLE1Q53GS7 698 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-211ENST00000533012 PCID2Q5JVF3 399 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms