RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ZNF569Q5MCW4 686 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 TMC3Q7Z5M5 1100 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 NRSN1Q8IZ57 195 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 C1orf54Q8WWF1 131 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 SCAMP4Q969E2 229 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 LGR4Q9BXB1 951 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 ZFYVE1Q9HBF4 777 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 UCKL1Q9NWZ5 548 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 CD84Q9UIB8 345 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 TDRD6O60522 2096 aaKnown RBP19.82■□□□□ 0.76
CPSF1-209ENST00000532725 CEP104O60308 925 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 AGTP01019 485 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 FGGP02679 453 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 PIRTP0C851 137 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 TSHRP16473 764 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 JUNDP17535 347 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 PSMB4P28070 264 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 TEAD1P28347 426 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 ADRA1AP35348 466 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 SPINT3P49223 89 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 GEMP55040 296 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 HNRNPKP61978 463 aaKnown RBP eCLIP19.82■□□□□ 0.76
CPSF1-209ENST00000532725 SLC1A5Q15758 541 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 SIRPB2Q5JXA9 342 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 N4BP2L1Q5TBK1 243 aaPredicted RBP19.82■□□□□ 0.76
CPSF1-209ENST00000532725 ENPP7Q6UWV6 458 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 RANBP10Q6VN20 620 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 NYAP1Q6ZVC0 841 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 ZNF765Q7L2R6 523 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 LYSMD3Q7Z3D4 306 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 GLRX5Q86SX6 157 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 KLHDC8BQ8IXV7 354 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 IPMKQ8NFU5 416 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 CCHCR1Q8TD31 782 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 AP2M1Q96CW1 435 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 RTP4Q96DX8 246 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 WDR24Q96S15 920 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 SRPK1Q96SB4 655 aaKnown RBP19.82■□□□□ 0.76
CPSF1-209ENST00000532725 TEX101Q9BY14 249 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 PYCARDQ9ULZ3 195 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 SHOC2Q9UQ13 582 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 AAR2Q9Y312 384 aaKnown RBP19.82■□□□□ 0.76
CPSF1-209ENST00000532725 SPO11Q9Y5K1 396 aa19.82■□□□□ 0.76
CPSF1-209ENST00000532725 SPAARA0A1B0GVQ0 90 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 RGSL1A5PLK6 1076 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 USP27XA6NNY8 438 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 SOD1P00441 154 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 GIMD1P0DJR0 217 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 HTR1BP28222 390 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 CHRNA4P43681 627 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 KIAA1024LP59773 190 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 PRPSAP1Q14558 356 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 CCNG2Q16589 344 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 PARP6Q2NL67 630 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 SLC35F6Q8N357 371 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 SLC25A41Q8N5S1 370 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 EID2Q8N6I1 236 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 TSACCQ96A04 125 aaPredicted RBP19.81■□□□□ 0.76
CPSF1-209ENST00000532725 AGAP2Q99490 1192 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 CDC6Q99741 560 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 TCEAL2Q9H3H9 227 aaPredicted RBP19.81■□□□□ 0.76
CPSF1-209ENST00000532725 WDR26Q9H7D7 661 aa19.81■□□□□ 0.76
CPSF1-209ENST00000532725 TMEM202A6NGA9 273 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 CACNB4O00305 520 aaPredicted RBP19.8■□□□□ 0.76
CPSF1-209ENST00000532725 AURKAO14965 403 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 METTL18O95568 372 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 HLA-DPA1P20036 260 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 SIM1P81133 766 aaPredicted RBP19.8■□□□□ 0.76
CPSF1-209ENST00000532725 PPARDQ03181 441 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 CCDC173Q0VFZ6 552 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 SNX1Q13596 522 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 ALG11Q2TAA5 492 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 INAVAQ3KP66 663 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 KCTD16Q68DU8 428 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 DRICH1Q6PGQ1 229 aaPredicted RBP19.8■□□□□ 0.76
CPSF1-209ENST00000532725 PHACTR4Q8IZ21 702 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 BTN2A2Q8WVV5 523 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 WDR92Q96MX6 357 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 RIOK2Q9BVS4 552 aaKnown RBP19.8■□□□□ 0.76
CPSF1-209ENST00000532725 FAM83DQ9H4H8 585 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 PKD2L2Q9NZM6 624 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 ZNF148Q9UQR1 794 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 DRG1Q9Y295 367 aaKnown RBP19.8■□□□□ 0.76
CPSF1-209ENST00000532725 ZKSCAN5Q9Y2L8 839 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 ZNF711Q9Y462 761 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 CSNK1G3Q9Y6M4 447 aa19.8■□□□□ 0.76
CPSF1-209ENST00000532725 PDE2AO00408 941 aaPredicted RBP19.79■□□□□ 0.76
CPSF1-209ENST00000532725 TRIM38O00635 465 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 TNFRSF10CO14798 259 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 SCAMP1O15126 338 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 KIF5CO60282 957 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 KCNA4P22459 653 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 GPR1P46091 355 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 HK3P52790 923 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 SRP54P61011 504 aaKnown RBP19.79■□□□□ 0.76
CPSF1-209ENST00000532725 CDK3Q00526 305 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 FAXCQ5TGI0 409 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 KCTD11Q693B1 232 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 RAET1GQ6H3X3 334 aa19.79■□□□□ 0.76
CPSF1-209ENST00000532725 ADAMTSL4Q6UY14 1074 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms