RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 FAM220AQ7Z4H9 259 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 C3orf14Q9HBI5 128 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 SLC38A8A6NNN8 435 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 PRMT5O14744 637 aaPredicted RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 RNASEH2AO75792 299 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 CSNK2BP67870 215 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 TRIQKQ629K1 86 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 PARGQ86W56 976 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 IRF2BP1Q8IU81 584 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 CDYL2Q8N8U2 506 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 ZNF398Q8TD17 642 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 TFAP2BQ92481 460 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 C11orf84Q9BUA3 381 aaPredicted RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 KCTD5Q9NXV2 234 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 COG5Q9UP83 839 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 STXBP5LQ9Y2K9 1186 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 PLIN4Q96Q06 1357 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 NOL4O94818 638 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 SNRPB2P08579 225 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 GRIA4P48058 902 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 ERVK-21P61565 698 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 RPL38P63173 70 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 COX10Q12887 443 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 PACS1Q6VY07 963 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 SRFBP1Q8NEF9 429 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 ACBD6Q9BR61 282 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 TRMOQ9BU70 441 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 VWA7Q9Y334 891 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 NPEPPSL1A6NEC2 478 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 AP3D1O14617 1153 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 MED26O95402 600 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 EOMESO95936 686 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 VIPP01282 170 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 TPP2P29144 1249 aaPredicted RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 DRG2P55039 364 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 NDUFA9Q16795 377 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 TTMPQ5BVD1 217 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 CERS6Q6ZMG9 384 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 LDB1Q86U70 411 aaPredicted RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 OR8H2Q8N162 312 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 C2orf15Q8WU43 125 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 HMCESQ96FZ2 354 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 H0YC42 278 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 WWP2O00308 870 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 FFAR2O15552 330 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 MGRN1O60291 552 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 ATG13O75143 517 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 SASH3O75995 380 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 ITGA2BP08514 1039 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 BNC1Q01954 994 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 MON1BQ7L1V2 547 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 BNIPLQ7Z465 357 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 ARMC8Q8IUR7 673 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 SCAMP5Q8TAC9 235 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 RPL10LQ96L21 214 aaKnown RBP14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 HDHD2Q9H0R4 259 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 GULP1Q9UBP9 304 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 MTF2Q9Y483 593 aaPredicted RBP14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 RGPD5Q99666 1765 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 ARFGEF2Q9Y6D5 1785 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 FAM155BO75949 473 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 CBX6O95503 412 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 BMP7P18075 431 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 TMED10P49755 219 aaKnown RBP14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 PKNOX1P55347 436 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 SMYD1Q8NB12 490 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 RNASE11Q8TAA1 199 aaKnown RBP14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 SLC38A2Q96QD8 506 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 AIF1LQ9BQI0 150 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 PRDM8Q9NQV8 689 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 RAP2CQ9Y3L5 183 aa14.77□□□□□ -0.04
PCDHA9-202ENST00000532602 PNMA8CA0A1B0GUJ8 204 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 FAM237BA0A1B0GVD1 139 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 FSCN2O14926 492 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 CDK14O94921 469 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 SEMG2Q02383 582 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 DSC2Q02487 901 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 SLC34A1Q06495 639 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 ARMC4Q5T2S8 1044 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 ZC3H7AQ8IWR0 971 aaKnown RBP14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 OR14C36Q8NHC7 312 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 CYLDQ9NQC7 956 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 HMGXB4Q9UGU5 601 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 GTF2IRD1Q9UHL9 959 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 EFR3BQ9Y2G0 817 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 COL1A1P02452 1464 aaPredicted RBP14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 LINC00032P0C843 101 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 PTPN9P43378 593 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 ILF3Q12906 894 aaKnown RBP eCLIP14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 ATP13A5Q4VNC0 1218 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 FAM182AQ5T1J6 154 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 PCDH20Q8N6Y1 951 aaKnown RBP14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 ART4Q93070 314 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 ZNF607Q96SK3 696 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 SEMA6AQ9H2E6 1030 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 XPNPEP1Q9NQW7 623 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 PCDHGB3Q9Y5G1 929 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 LYVE1Q9Y5Y7 322 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 GLYATL1P3A0A0U1RQE8 302 aa14.77□□□□□ -0.05
PCDHA9-202ENST00000532602 ZCCHC18P0CG32 403 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms