RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 NDNQ99608 321 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 SAR1AQ9NR31 198 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ATAD3AQ9NVI7 634 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 PHF24Q9UPV7 400 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ATG7O95352 703 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CHRNA1P02708 482 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CA3P07451 260 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 SERPINB1P30740 379 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CCR3P51677 355 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 IL10RBQ08334 325 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 RHBDF2Q6PJF5 856 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 MMAAQ8IVH4 418 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 POU5F2Q8N7G0 328 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 PRELID2Q8N945 189 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 TTC29Q8NA56 475 aaPredicted RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 TTLL2Q9BWV7 592 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 GGA2Q9UJY4 613 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 FBXW11Q9UKB1 542 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 DUSP12Q9UNI6 340 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 ACTL7BQ9Y614 415 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 MAN2B1O00754 1011 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 RPP40O75818 363 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 MLYCDO95822 493 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 TBX18O95935 607 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 NOS3P29474 1203 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 FOXM1Q08050 763 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 COL9A3Q14050 684 aaPredicted RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 GSTA3Q16772 222 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CST9Q5W186 159 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 PLEKHA7Q6IQ23 1121 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CASP12Q6UXS9 341 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 PTGR2Q8N8N7 351 aaPredicted RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 ART4Q93070 314 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 C8orf48Q96LL4 319 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 TMEM79Q9BSE2 394 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 ACAT2Q9BWD1 397 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 TRIT1Q9H3H1 467 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 EBF3Q9H4W6 596 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CCSER2Q9H7U1 834 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 MTMR11A4FU01 709 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 MFSD11O43934 449 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 ADSSP30520 456 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 DRG2P55039 364 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 OASLQ15646 514 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 ZFP1Q6P2D0 407 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 UBE2R2Q712K3 238 aaPredicted RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 TSEN2Q8NCE0 465 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 ACMSDQ8TDX5 336 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 FNIP1Q8TF40 1166 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CDH19Q9H159 772 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 SLC12A4Q9UP95 1085 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 COPG1Q9Y678 874 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 COL2A1P02458 1487 aaPredicted RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 EDDM13A0A1B0GTR0 161 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 FSCN2O14926 492 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 MARCKSL1P49006 195 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 ARRB1P49407 418 aaPredicted RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CACNG1Q06432 222 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 IRGCQ6NXR0 463 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 RNF19BQ6ZMZ0 732 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 PROX1Q92786 737 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 PCDHB18PQ96TA0 734 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 SMAD5Q99717 465 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 APOBEC3GQ9HC16 384 aaKnown RBP11.29□□□□□ -0.6
PTPRK-221ENST00000532331 DNAJC28Q9NX36 388 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 INVSQ9Y283 1065 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 PCDHB1Q9Y5F3 818 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 PCDHGC4Q9Y5F7 938 aa11.29□□□□□ -0.6
PTPRK-221ENST00000532331 CPED1A4D0V7 1026 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 COPZ1P61923 177 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 DSC2Q02487 901 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 GHRHRQ02643 423 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ALG11Q2TAA5 492 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 CAPN13Q6MZZ7 669 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 CHST15Q7LFX5 561 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 VN1R5Q7Z5H4 357 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 CCDC185Q8N715 623 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 KCTD13Q8WZ19 329 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 LINGO1Q96FE5 620 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 RNF145Q96MT1 663 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 CDRT15Q96T59 188 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 NMUR1Q9HB89 426 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 TMEM216Q9P0N5 145 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 PAPSS1O43252 624 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 SMNDC1O75940 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 OR6A2O95222 327 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 KCNH1O95259 989 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 RHOP08100 348 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 IFNGR2P38484 337 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 RAB10P61026 200 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 ANO7Q6IWH7 933 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 C12orf76Q8N812 135 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-221ENST00000532331 TFAP2BQ92481 460 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
PTPRK-221ENST00000532331 MYLK2Q9H1R3 596 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms