RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ST6GALNAC4Q9H4F1 302 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 TMEM184CQ9NVA4 438 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 MTMR10Q9NXD2 777 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 CWC15Q9P013 229 aaKnown RBP3.04□□□□□ -1.92
CD44-234ENST00000531873 EXO1Q9UQ84 846 aaKnown RBP3.04□□□□□ -1.92
CD44-234ENST00000531873 CCL27Q9Y4X3 112 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 STON1Q9Y6Q2 735 aa3.04□□□□□ -1.92
CD44-234ENST00000531873 SMIM35A0A1B0GVV1 85 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 URADA6NGE7 173 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 H3BQ06 376 aaPredicted RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 STMND1H3BQB6 276 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ADAM10O14672 748 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 MDM4O15151 490 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 PRPF4O43172 522 aaKnown RBP eCLIP3.03□□□□□ -1.92
CD44-234ENST00000531873 AVILO75366 819 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 AFPP02771 609 aaKnown RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 PRKCGP05129 697 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ABCB1P08183 1280 aaPredicted RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 CHRNB2P17787 502 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 CPT2P23786 658 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 HOXD9P28356 352 aaPredicted RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 AVPR1AP37288 418 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ARHGAP25P42331 645 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 CAPZA2P47755 286 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 LIG4P49917 911 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 GPR143P51810 404 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ZNF41P51814 821 aaPredicted RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 KRTAP10-9P60411 292 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 MRPS34P82930 218 aaKnown RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 TFAP4Q01664 338 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 NHLH1Q02575 133 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 GHRHRQ02643 423 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 GAD2Q05329 585 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 DDR1Q08345 913 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 SLC10A2Q12908 348 aaPredicted RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 SNTB1Q13884 538 aaKnown RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 DAZAP2Q15038 168 aaPredicted RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 ARHGEF6Q15052 776 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 DLG2Q15700 870 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 C15orf59Q2T9L4 293 aaPredicted RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 ZNF284Q2VY69 593 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 MMEL1Q495T6 779 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 EPHA10Q5JZY3 1008 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 NCAPH2Q6IBW4 605 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 MIS18BP1Q6P0N0 1132 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 DEF8Q6ZN54 512 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 GALNTL5Q7Z4T8 443 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 TEX45Q8NA69 505 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 APPL2Q8NEU8 664 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ENGASEQ8NFI3 743 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 BICD2Q8TD16 824 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ZNF333Q96JL9 665 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ADPGKQ9BRR6 497 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 SYT17Q9BSW7 474 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 C1QTNF1Q9BXJ1 281 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 SPRY4Q9C004 299 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 PIGMQ9H3S5 423 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ERVMER34-1Q9H9K5 563 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 ADARB2Q9NS39 739 aaKnown RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 ARHGEF38Q9NXL2 777 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 CRNNQ9UBG3 495 aaPredicted RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 FBXW11Q9UKB1 542 aa3.03□□□□□ -1.92
CD44-234ENST00000531873 R3HDM2Q9Y2K5 976 aaKnown RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 WBP11Q9Y2W2 641 aaKnown RBP3.03□□□□□ -1.92
CD44-234ENST00000531873 ZNF644Q9H582 1327 aaPredicted RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 GPR75-ASB3A0A0A6YYF3 556 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 TRBC2A0A5B9 178 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 E5RJQ4 531 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 PPP6CO00743 305 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 LDB2O43679 373 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 TLR2O60603 784 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 DAB1O75553 588 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 JRKO75564 520 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 GGPS1O95749 300 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 ICAM1P05362 532 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 QDPRP09417 244 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 CBSLP0DN79 551 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 MYBL1P10243 752 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 ACTN1P12814 892 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 ENO3P13929 434 aaPredicted RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 MAOAP21397 527 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 LMO1P25800 156 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 MPGP29372 298 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 CBSP35520 551 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 THPOP40225 353 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 EIF2S3P41091 472 aaKnown RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 LMAN1P49257 510 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 CDH12P55289 794 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 SELENOVP59797 346 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 ID2Q02363 134 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 PPARDQ03181 441 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 ZNF91Q05481 1191 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 SREBF2Q12772 1141 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 ITGADQ13349 1161 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 KCNC3Q14003 757 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 INPP5JQ15735 1006 aaPredicted RBP3.02□□□□□ -1.93
CD44-234ENST00000531873 SUPT20HL1Q3ZLR7 823 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 HEPHL1Q6MZM0 1159 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 DLK2Q6UY11 383 aa3.02□□□□□ -1.93
CD44-234ENST00000531873 RBPMS2Q6ZRY4 209 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms